| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_3823 |
|---|
| Symbol | |
|---|
| ID | 5081157 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella putrefaciens CN-32 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009438 |
|---|
| Strand | + |
|---|
| Start bp | 4434227 |
|---|
| End bp | 4435303 |
|---|
| Gene Length | 1077 bp |
|---|
| Protein Length | 358 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 640501035 |
|---|
| Product | permease |
|---|
| Protein accession | YP_001185328 |
|---|
| Protein GI | 146294904 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0701] Predicted permeases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTCCCG AAACTATCAC TATGCTGAAA GAAACGGTCA ATATGTTCGT CTTTCTTGCA
TTTGAGCTAA CCTTGTTATT TCTTGCCATA AGCTACCTCG TCGGTATGCT GCAAGAATTC
ATCACGCCGC AAAAAGTGCA ATCCATATTA AGTTCCCGCC ATGGTCGAGG CTATATAGTG
GCCGCCTTGC TCGGGTCTAT CACTCCCTTT TGCTCCTGCT CCACTATCCC ATTCTTAAAA
GGTTTACTCA GGGCCCGTGC GGGATTTGGC CCTATGATGG TATTCCTATT TGCCAGCCCA
TTACTTAATC CGGTGATTAT CGGGCTTTTT GTGGTCACCT TTGGGTTTAA GGTCGCGCTA
TTTTATTTTA CGGTCGCTCT GGGTGTCTCT GTAATAGCAG GTTACTTGCT GGAAAAACTC
GGATTTGAAC AATATGTGCG TCAAGAGGCC TATGCTCAGG CAGATACAGC CACTGCTGCT
TCATGTTGCG ATACTAAACC GTCACCGACC GCGAGTAGCG GTTGCGAAGT AACCCCCGCA
CCCGTTGTCA GCGCATGTTG TGATAGTAAA ACCGCCCCCG CGGTGACCTT GTGTTGCGTT
ACTCAAGCTG AGCCTATTGC AACTTCGTGT TGCCCTTCCC AAACCGTGCC GCAAAACAAA
CCTCAGAGCC GCTGGGTAAA GGTTTGGCGC GCCACTTGGA AGGACTTCAA ACAAGTGCTG
CCCTATCTGT TTATCGGTGT GCTATTGGGT TCAATGATCT ACGGATTTAT GCCAACGGAG
TTAATCGTTC AGTATGCTGG AGAAGCCACA TGGTATGCGA TCCCCATTGC CGCATTAATT
GGGATCCCAC TCTATATTCG CGCCGAAGCG GTTATCCCAC TCAGCGCCGC GTTAATCCAA
AAAGGCATGG CGATGGGCTC AGTAATGGCG TTGATCATAG GGAGCGCCGG AGCAAGTTTG
ACCGAAGTCA TATTACTTAA AGCCATTTTT AAAGGTCAGA TGATTGCCGC ATTTCTCAGC
GTTATTTTAG GCATGGCTGT GGGTGCAGGG TTTCTGTATA GCTATCTATT TAGCTAA
|
|---|
| Protein sequence | MTPETITMLK ETVNMFVFLA FELTLLFLAI SYLVGMLQEF ITPQKVQSIL SSRHGRGYIV
AALLGSITPF CSCSTIPFLK GLLRARAGFG PMMVFLFASP LLNPVIIGLF VVTFGFKVAL
FYFTVALGVS VIAGYLLEKL GFEQYVRQEA YAQADTATAA SCCDTKPSPT ASSGCEVTPA
PVVSACCDSK TAPAVTLCCV TQAEPIATSC CPSQTVPQNK PQSRWVKVWR ATWKDFKQVL
PYLFIGVLLG SMIYGFMPTE LIVQYAGEAT WYAIPIAALI GIPLYIRAEA VIPLSAALIQ
KGMAMGSVMA LIIGSAGASL TEVILLKAIF KGQMIAAFLS VILGMAVGAG FLYSYLFS
|
|---|
| |