Gene Sputcn32_3815 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_3815 
Symbol 
ID5081149 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand- 
Start bp4429333 
End bp4430343 
Gene Length1011 bp 
Protein Length336 aa 
Translation table11 
GC content51% 
IMG OID640501027 
Productglyceraldehyde-3-phosphate dehydrogenase 
Protein accessionYP_001185320 
Protein GI146294896 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0057] Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase 
TIGRFAM ID[TIGR01534] glyceraldehyde-3-phosphate dehydrogenase, type I 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAATCA AAATCGGGAT CAACGGCTTT GGCCGTATGG GACGTTTAGC GCTGCGCGCT 
GCTTGGGGCT GGAATGACGT TGAGTTTGTG CAAATTAACG ACCCCGCAGG GGATGCGGCG 
ACCTTAGCCC ATCTGCTGAC ATTCGATTCT GTGCATGGCC GTTGGCAGCA TGAGGCGAGC 
AGTGAAGGTG ATGACATCAT TATCGATGGT AAGCGTATTA GCTGCACACG CAATAAAACC 
ATCGCCGAAA CCGATTGGTC CGCCTGCGAT GTGGTGATTG AAGCTTCGGG TAAGATGAAA 
ACCAAAGCCG TGCTGCAAGC TTATTTAGAT CAAGGCGTTA AACGTGTTGT GGTGACGGCA 
CCTGTTAAGG AAGAGGGGGT GTTGAACGTC GTTATGGGGG TGAATCATCA GCTCTATGAT 
AAAGCCATTC ATCCGATTGT GACTGCGGCA TCTTGTACCA CTAACTGCTT GGCGCCAATT 
GTTAAAGTCA TCCACGAAAA CCTCGGCATA GTGCATGGTT CCATGACGAC CATTCACGAT 
ATTACCAACA CTCAAACGAT TTTAGATGCA CCGCACAAAG ATCTTCGTCG CGCGCGGGCC 
TGTGGTTTAA GCCTCATCCC CACGACGACG GGCTCAGCGA CGGCCATTAC CCATATTTTC 
CCTGAACTCA AAGGTAAGCT CAACGGCCAT GCGGTGCGGG TACCGCTGGC AAATGCATCT 
TTAACCGACT GTGTATTTGA GGTGAGTCGT AAAACCACCG AGGCAGAGGT CAATCGCCTG 
TTAAAAGAGG CCGCAGAAGG GCCATTAAAA GGCATTTTAG GTTATGAGGA ACGGCCATTA 
GTGTCGGTGG ATTATAAAAC CGATCCGCGT TCGAGCATTA TCGATGCGCT ATCGACCATG 
ATCATCAATG GCACTCAGGT CAAACTCTAC GCTTGGTATG ATAACGAGTG GGGTTACGCT 
AACCGTGCGG CCGAGCTGGC CCGTATGGTC GGTCTGATGG ATAAGGCATA A
 
Protein sequence
MTIKIGINGF GRMGRLALRA AWGWNDVEFV QINDPAGDAA TLAHLLTFDS VHGRWQHEAS 
SEGDDIIIDG KRISCTRNKT IAETDWSACD VVIEASGKMK TKAVLQAYLD QGVKRVVVTA 
PVKEEGVLNV VMGVNHQLYD KAIHPIVTAA SCTTNCLAPI VKVIHENLGI VHGSMTTIHD 
ITNTQTILDA PHKDLRRARA CGLSLIPTTT GSATAITHIF PELKGKLNGH AVRVPLANAS 
LTDCVFEVSR KTTEAEVNRL LKEAAEGPLK GILGYEERPL VSVDYKTDPR SSIIDALSTM 
IINGTQVKLY AWYDNEWGYA NRAAELARMV GLMDKA