| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_3804 |
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| Symbol | |
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| ID | 5081138 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 4415097 |
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| End bp | 4417538 |
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| Gene Length | 2442 bp |
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| Protein Length | 813 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640501017 |
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| Product | RNA-binding S1 domain-containing protein |
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| Protein accession | YP_001185310 |
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| Protein GI | 146294886 |
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| COG category | [K] Transcription |
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| COG ID | [COG2183] Transcriptional accessory protein |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATTGA TCATGCGCCT GTGGTATCGT GGGCGCAATT ACGACTCATC CGTTAAACAC
GATATTTTAT TTATGCAAAC GACTTCCCAA ACCATTGCAC ATAACATCGC TCAAATCATT
GCCCAAGAAC TGAATGTTCG TGAGCAGCAA GTTACCGCGA CCATAGCATT GCTCGACGAT
GGGGCTACCG TTCCTTTTGT GGCGCGCTAC CGTAAAGAAG CTACCGGTGG CTTAGACGAT
ACCCAATTAC GTACCCTACA TAGTCGTTTA GCCTATCTGC GAGAGTTGAA CGATAGACGC
CAAGTGATTT TGTCCAGTAT TCAGGCTCAA GGTAAATTAA CCGCAGAGCT GCAATTTGCT
ATTGATAGTG CCGACAGTAA GACTCGCCTC GAAGATCTCT ATTTACCCTT CAAACCTAAG
CGCCGTACTA AAGGGCAAAT CGCCATTGAA GCGGGCCTTG AACCATTAGC CGATGCACTG
CTTGCGGATC GTCATGCCGA TATAGAAGAA CTGGCTGCGG ATTATATCAA TGAAAATGCT
GGTTTTGCCG ATACTAAAGC CGTGCTCGAA GGTGCTCGTT ATATTTTGAT GGAACGCTAC
GCCGAAGATG CGGAACTATT GCGCAAAGTG CGTGAGCATT TAAGCCAAAA CAGCGTATTA
GAAAGCCGTG TGATCGCGGG TAAAGAAAAA GAGGGCGCTA AGTTCCGTGA CTATTTCGAG
CACAATGAGT TGTTATCTAA AGTGCCGTCA CACCGCGCTT TAGCTATGTT ACGTGGTCGC
AATGAAGGCT TTTTATCCTT ATCAATGAAT GCCGACCCTA ATGCACAAGC AGGTCAAGGC
AGTTACTGTG AAGTGATTAT TGCAGACCAT TTAGGTTTGA AACTGGGTGA TAGTAGTGTT
GATCAATGGT TAAAAACCGT AGTAACGGCG ACATGGCGTA TCAAAATTGC ATTGCAAATG
GAGACCGAGT TTATTTCGCA AATGCGTGAA CGCGCTGAAG CCGAAGCCAT TAAGGTCTTT
GCCCGTAACT TGGGCGATTT ACTGATGGCG GCCCCCGCTG GTGCAAAAGC CACCATGGGA
CTCGATCCTG GTTTACGTAC TGGTGTTAAA GTGGCTGTGG TTGATAACAC GGGTAAGCTC
CTTAGCCATG CGACAATTTT CCCCCATGCA CCGCAAAATT TATGGGAAAA ATCGATTCGT
ACTTTAGCCA ACCTTGTGAA TATGCATAAG GTTGAACTGA TCGCAATTGG TAACGGTACC
GCCTCCCGCG AAACTGACAA ACTTGCTGCC GAATTAATTG CCAGTATAAA AGATACCCAT
CCACATCTCA CCAAGGTCAT GGTGAGTGAA GCGGGTGCCT CGGTTTATTC GGCATCGGAG
TTGGCCGCAC TCGAATTTCC GGAACTCGAT GTCTCTATTC GCGGTGCAGT TTCTATCGCC
CGCCGTCTGC AAGATCCTCT GGCTGAGTTA GTGAAAATTG AGCCTAAGTC TATCGGAGTC
GGTCAATATC AGCACGATGT CAGTCAAAGC CAATTATCTA GCTCGCTTGA AGCCGTAGTC
GAAGACTGTG TAAACGGTGT GGGTGTTGAT TTGAATATGG CTTCAGTGCC GTTATTGTCG
CAAGTGGCTG GTTTAAATAA GACCTTAGCG AAAAATGTGG TCGATTACCG CGATGCCAAT
GGTCAGTTTA AAAACCGTAA AGAGCTACTT AAAGTGCCTC GTTTAGGGCC CAAGGCTTAT
GAGCAAGCGG CGGGGTTTTT ACGCATTCGT GAAGGAGATA ATCCGCTCGA TATGTCTGCC
GTGCATCCTG AAGCTTATTC GCTGGTGGAA ACCATAGCCA AAGCTAAACA GGTTGAATTA
GCAAGTCTTA TTGGTAACTC AGAACTGTTA CGAACGATTA ATGCACAGGA GTTTATCACG
CCGGAATTTG GTCTCCCTAC CGTGACCGAT ATTTTAGCCG AGCTGGATAA ACCGGGACGC
GATCCCCGCG GTGAGTTTAA AACCGCTAAG TTTAAAGAGG GGATTGAAGA ACTTAAGCAT
CTCAAACCCG AAATGATCCT CGAAGGTGTA GTGACGAACG TGACTAACTT TGGTGCCTTT
GTCGATATCG GTGTGCATCA AGACGGTTTA GTCCATATTT CTTCATTGAC CGACAAATTT
ATCAGCGATC CCCACACAGT GGTGAAAGCG GGTGATGTGG TGAAGGTTAA AGTGATGGAA
GTGGACGTTG AGCGCCGTCG TATTGGTTTG AGTATGCGTT TGGACGAGGC GATTGAACAA
AACAATGCTC AGGTTAAGCA TTCATCGCAA ACCAAAGCCA ATCACAAATT GACTTCGTCA
GGTAAAACCG CTCGCCCAGC TCAAAAGCCA GCGCCGAAAG CGCCCGCGAA TGCGGCTATG
GGTAACGCTT TTGCCGATGC TTTCGCTAAA CTGAAAAAGT AA
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| Protein sequence | MKLIMRLWYR GRNYDSSVKH DILFMQTTSQ TIAHNIAQII AQELNVREQQ VTATIALLDD
GATVPFVARY RKEATGGLDD TQLRTLHSRL AYLRELNDRR QVILSSIQAQ GKLTAELQFA
IDSADSKTRL EDLYLPFKPK RRTKGQIAIE AGLEPLADAL LADRHADIEE LAADYINENA
GFADTKAVLE GARYILMERY AEDAELLRKV REHLSQNSVL ESRVIAGKEK EGAKFRDYFE
HNELLSKVPS HRALAMLRGR NEGFLSLSMN ADPNAQAGQG SYCEVIIADH LGLKLGDSSV
DQWLKTVVTA TWRIKIALQM ETEFISQMRE RAEAEAIKVF ARNLGDLLMA APAGAKATMG
LDPGLRTGVK VAVVDNTGKL LSHATIFPHA PQNLWEKSIR TLANLVNMHK VELIAIGNGT
ASRETDKLAA ELIASIKDTH PHLTKVMVSE AGASVYSASE LAALEFPELD VSIRGAVSIA
RRLQDPLAEL VKIEPKSIGV GQYQHDVSQS QLSSSLEAVV EDCVNGVGVD LNMASVPLLS
QVAGLNKTLA KNVVDYRDAN GQFKNRKELL KVPRLGPKAY EQAAGFLRIR EGDNPLDMSA
VHPEAYSLVE TIAKAKQVEL ASLIGNSELL RTINAQEFIT PEFGLPTVTD ILAELDKPGR
DPRGEFKTAK FKEGIEELKH LKPEMILEGV VTNVTNFGAF VDIGVHQDGL VHISSLTDKF
ISDPHTVVKA GDVVKVKVME VDVERRRIGL SMRLDEAIEQ NNAQVKHSSQ TKANHKLTSS
GKTARPAQKP APKAPANAAM GNAFADAFAK LKK
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