| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_3798 |
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| Symbol | |
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| ID | 5081132 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 4409025 |
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| End bp | 4409702 |
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| Gene Length | 678 bp |
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| Protein Length | 225 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640501011 |
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| Product | two component transcriptional regulator |
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| Protein accession | YP_001185304 |
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| Protein GI | 146294880 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTGGTAT TACTGGTTGA AGACAATCGG CTTCTCTCTA ACAACATCAT TCAATATCTT
GAATTGAGTG GCATAGAGTG CGATTACGCG TTCAACCTAG CACAAGCGGA TATGCTCATT
AGTCAGCAGC AGTTCGATGC TATTATTCTC GACCTTAATT TACCGGACGG TGATGGCATT
GAGGCGTGTG AACGCTGGAA AGCGCAATGT TTTACTTCAC CTATCATCAT GCTAACCGCC
CGTAGTAGTT TGAATGAGCG CTTGGCTGGT TTTGCTGTTG GTGCTGATGA TTATTTAATA
AAACCTTTTG CGATGGAGGA ACTGGTCGCG CGATTAAAAG TGGTCGCTCA GCGTCGTCCC
GCGCCCCAAC GGTTGATTAT TGGCGACCTC GAAATCGATT TTGCAAATCA CATGGTGTAT
CGGCAAGGGC AACTGCTGGT TTTGTCTAAA ACCGGTTGGC AGATCTTGGC GTTGTTAGCA
AGGCGCAGCC CAGAAACAGT GAGTAGAGAA GAGATTGAAC GAATGCTTTG GCCCGACAGC
GCACCTGATA GTGACAGTTT GCGCAGCCAT ATTCATCTTT TGCGCCGAGT GATCGATCGC
CCCTTTGAGC GGCAAATATT ACATACGATT CGTGGTGTCG GTTTAAGTCT TAGGGATGAC
ATCAATGCAA GCGCCTAA
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| Protein sequence | MLVLLVEDNR LLSNNIIQYL ELSGIECDYA FNLAQADMLI SQQQFDAIIL DLNLPDGDGI
EACERWKAQC FTSPIIMLTA RSSLNERLAG FAVGADDYLI KPFAMEELVA RLKVVAQRRP
APQRLIIGDL EIDFANHMVY RQGQLLVLSK TGWQILALLA RRSPETVSRE EIERMLWPDS
APDSDSLRSH IHLLRRVIDR PFERQILHTI RGVGLSLRDD INASA
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