| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_3795 |
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| Symbol | |
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| ID | 5081129 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 4405012 |
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| End bp | 4406760 |
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| Gene Length | 1749 bp |
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| Protein Length | 582 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640501008 |
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| Product | flavocytochrome c |
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| Protein accession | YP_001185301 |
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| Protein GI | 146294877 |
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| COG category | [C] Energy production and conversion
[S] Function unknown |
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| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit
[COG3976] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR01813] flavocytochrome c |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.343394 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCATTATA AAAAATCCAT TATTGGTATT GCTGTCACGG CAACAGCGAT TATTGCTGGT
TGTCAAGCTA CCCATCAAAT AGTAAAAAGC CAAGGAACTG CTCAAGGCAA ACATGGCGAA
GTGCAGGTCG AAACCACATT CAAAGATGGG CATATTGTAG CTATTGATAT TATTAAACAA
AAAGAAAACA AAGTGCTTGC AGGAGCAGTA TTTAAAGATG TTAAACAGGC AATTATTGAT
AATAATTCTG TTGAAGTCGA TGGTATTACG GGCGCGACAG TAACGTCTAA AGCACTTAAA
GAAGCTGTGG GTAAAAGTAT TGAAGCGGCA GGAGTCACTC TTGTTGCAAC GGCTTCTGCT
AAGAAAAGTG AAGCATTAAC GCCTGCAGAA TATACCTATG ATGTGGTGAT TATTGGTTCC
GGTGGGGCAG GTTTTAGCGC GGGTTTAGAA GCGATAGCCG CAGGCCGCTC CGCCGTTATT
ATTGAAAAAA TGCCTATTAT CGGTGGTAAC TCATTGATTT CTGGTGCAGA GATGAATGTG
GCCGGTAGTT GGGTACAAAA GACTATGGGG ATCACCGATA GCAAAGAACT ATTTATCAGC
GATACGCTTA AAGGCGGTGA TTTTAAAGGC GATCCTGAGA TGGTTAAAAC CATGGTTGAT
AATGCAGTTG ATGCCGCGGA GTGGTTAAGA GATTACGTTA AAGTAGAATT TTATCCAGAT
CAGTTATTTC AGTTTGGTGG GCATAGTGTT AAACGGGCAT TAATCCCTAA AGGTCATACT
GGGGCTGAAG TCATTAGTAA GTTTTCGATT AAAGCTGATG AAGTCGGTTT ACCGATCCAT
ACCAATACTA AGGCTGAAAA GTTAATCCAA GATCAAACGG GTCGAATTGT TGGTGTAGAA
GCGACACATA ATGGCAAAAC CATCACCTAC CATGCTAAGC GCGGTGTTGT GGTTGCAACG
GGCGGCTTCT CCTCGAATAT GGAGATGCGC AAGAAATACA ATCCAGAACT CGACGAGCGT
TATGGTAGTA CTGGCCATCC TGGAGGAACC GGTGATGGTA TTGTGATGGC AGAGAAAATT
CACGCTGCAG CAAAAAATAT GGGATATATC CAGTCATATC CGATTTGTAG CCCAACCTCT
GGTGCGATAG CCTTGATTGC GGACTCTCGC TTTTTTGGTG CCGTGTTAAT TAACCAGAAG
GGTGAGCGTT TTGTTGAGGA ATTGGAGCGT CGTGATGTTA TTTCACATGC TATTTTAGAC
CAACCAGGCC GTTATACTTA TGTGCTCTGG AATCAAGACA TTGAAAACGT TGCTCATACA
GTTGAAATGC ATCAAGGTGA ACTTAAGGAA TTCACAAAAG ATGGGCTAAT GTATAAGGTC
GATACCCTAG AAGAAGCCGC TAAAGTCTTT AATATTCCTG AAGACACGTT GTTATCAACC
ATTAAAGACG TTAATCGTTA TGCCGCAACA GGAAAGGATG AAGCCTTTAA TCATCGCTCA
GGATTAGTCG ATTTAAGTAA AGGACCTTAT TGGATTTTAA AAGCGACACC TTCTGTGCAC
CATACTATGG GTGGCCTTGT GGTTGATACA CGTACTCGTG TACTTGATGA ACAAGGAAAG
GTGATTCCGG GCTTGTTTGC TGCGGGAGAA GTGACGGGGT TAACCCATGG AACCAATCGA
CTCGGTGGCA ATGCTTATAC AGACATTATT GTTTTTGGCC GTATCGCAGG ACAAGAAGCG
GCTAAATAG
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| Protein sequence | MHYKKSIIGI AVTATAIIAG CQATHQIVKS QGTAQGKHGE VQVETTFKDG HIVAIDIIKQ
KENKVLAGAV FKDVKQAIID NNSVEVDGIT GATVTSKALK EAVGKSIEAA GVTLVATASA
KKSEALTPAE YTYDVVIIGS GGAGFSAGLE AIAAGRSAVI IEKMPIIGGN SLISGAEMNV
AGSWVQKTMG ITDSKELFIS DTLKGGDFKG DPEMVKTMVD NAVDAAEWLR DYVKVEFYPD
QLFQFGGHSV KRALIPKGHT GAEVISKFSI KADEVGLPIH TNTKAEKLIQ DQTGRIVGVE
ATHNGKTITY HAKRGVVVAT GGFSSNMEMR KKYNPELDER YGSTGHPGGT GDGIVMAEKI
HAAAKNMGYI QSYPICSPTS GAIALIADSR FFGAVLINQK GERFVEELER RDVISHAILD
QPGRYTYVLW NQDIENVAHT VEMHQGELKE FTKDGLMYKV DTLEEAAKVF NIPEDTLLST
IKDVNRYAAT GKDEAFNHRS GLVDLSKGPY WILKATPSVH HTMGGLVVDT RTRVLDEQGK
VIPGLFAAGE VTGLTHGTNR LGGNAYTDII VFGRIAGQEA AK
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