| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_3792 |
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| Symbol | |
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| ID | 5081076 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 4400694 |
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| End bp | 4402064 |
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| Gene Length | 1371 bp |
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| Protein Length | 456 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640501005 |
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| Product | MATE efflux family protein |
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| Protein accession | YP_001185298 |
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| Protein GI | 146294874 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTACTG CAAAATCAAC CGCACTCGCA CTACTGTTTA ATGGCAACAA AAATCGCCAA
CTGTTCGCGC TTGCCCTACC GATGATCCTC TCAAATATCA CCATTCCACT CTTAGGATTA
GTGGATACGG CTGTGATAGG TCATCTAAGT GACGCCTATT ATTTAGGTGG GGTATCACTT
GGGTCAACGA TTATCACCTT AATCATTTGG TTATTAGGTT TTTTACGAAT GGCGACCACA
GGGTTAGTCG CACAGGCTTA TGGTGCAAAT GATATTCACG CTCAACATAA ACTCTTAGTT
CAAGGTGCTA TTTTAGCCAT ATTGCTGGGA ATGGGTCTTA TTGCTTTGCA AGCTCCAATA
CTGAATTTGG CGCTGGGCTT GTCCGAAGCA AGCCGTGAGG TCGAGCATTA TTGTCGCGAG
TATTTTCAGG TACGGATTTG GTCCACACCC TTCGCCCTGC TCAATTTAGT GATGTTAGGT
TGGCTCTTAG GGCGACAACA ACCTAAAGCC GCCATGTGGC AACTCATACT CGCAAACTTA
GCCAATATTA TTCTCGACTT AGTGTTTGTG CTTGGCTTAG GCTGGGGTGT AAAAGGTGCC
GCCCTCGCCT CAATATTTGC CGATATCACC GCCTTCTCAG TTGCATTCAC TATGGTGCGA
CAACAACTCA AGCGCGCTCC CGATTTTCAC TTATTCCAGC TATTACCCCA TGTCACCCTG
ATGGGTTATG GCAAGTTACT GAGGCTCAAT ACCGATATTT TTATCCGCAG CCTTTGCCTG
CAGACAGCTT TTGCGTTTAT GACATTCCAT GGTGCTGGCC TAGGTGATAA TACCGTTGCA
GCCAATGCAG TGTTATTGAA TTTACTGCTA TTAATCTCCT ATGCCCTCGA TGGCATAGCC
TATTATGCCG AAGCAGAAGT GGGCAAAGCC TATGGTCAAA AGCGCGCGCA GCAATTGCAT
GAAGCCGTGG TGCTGGCCTG GTGTTGGTCT GCCATCACTG CACTTGGGTT TACACTGATA
TTTAGCCTTT GGGGAAGCCA TATAATTGAA CTATTGACCA GTATTGATGA GGTCAGAACC
ACAGCACAGA CTTATCTGAT TTGGCTGGTA TTGCTACCGC TTTGGTCTTT TAGCTCTTAC
CTATTCGACG GGGTTTACAT AGGAGCGGCG AAAGGAAAAG TGATGCGTAA TAGCATGATA
CTCGCCACCT TTGGGGCGTT TTTCCCAACA TGGTATTTAT TGCAGGCGTT ATTATTATCC
GAGCAAGCCA ATCATGCCCT CTGGGCCGCC ATGACCGTTT TTATGCTCAC TCGCAGCCTC
ACTCTCGGGG CACATTATCG CTTTAGTAAG ACGTTCCAAC TGCACTCTTA G
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| Protein sequence | MTTAKSTALA LLFNGNKNRQ LFALALPMIL SNITIPLLGL VDTAVIGHLS DAYYLGGVSL
GSTIITLIIW LLGFLRMATT GLVAQAYGAN DIHAQHKLLV QGAILAILLG MGLIALQAPI
LNLALGLSEA SREVEHYCRE YFQVRIWSTP FALLNLVMLG WLLGRQQPKA AMWQLILANL
ANIILDLVFV LGLGWGVKGA ALASIFADIT AFSVAFTMVR QQLKRAPDFH LFQLLPHVTL
MGYGKLLRLN TDIFIRSLCL QTAFAFMTFH GAGLGDNTVA ANAVLLNLLL LISYALDGIA
YYAEAEVGKA YGQKRAQQLH EAVVLAWCWS AITALGFTLI FSLWGSHIIE LLTSIDEVRT
TAQTYLIWLV LLPLWSFSSY LFDGVYIGAA KGKVMRNSMI LATFGAFFPT WYLLQALLLS
EQANHALWAA MTVFMLTRSL TLGAHYRFSK TFQLHS
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