Gene Sputcn32_3786 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_3786 
Symbol 
ID5081070 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp4395712 
End bp4396467 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content45% 
IMG OID640500999 
Producthypothetical protein 
Protein accessionYP_001185292 
Protein GI146294868 
COG category[S] Function unknown 
COG ID[COG3346] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGATATC CTTACTGTCT GCTGAATAAA TTAACCGTTT TTTTGTTGAT CTTGACTGTG 
ACTGTATTCG TGATTCTGGT CAAGCTAGGG CTATGGCAAC TCCATCGCGG AGAAGAAAAA
GCCTTGTTAT TAGCTCAAAT GGAATCCAGA CAAGCCTTAG CGCCGCTGAC CTTTAAACAA
CTTTTACAAA AAATCCATCT AGAAGATGTC ACAGGTTATC GCCTCAGTAT CACTGCCTCA
CCTGCCAATG CGCAAATCTG GCTACTCGAC AATCAAGTCT ATCAGGGGCA AGTGGGATAT
CTAGCATTTC AAGCTCTGGA AGTTGAGCCG GAAAAACCTT GGCTACTGGT TGAATTAGGC
TTTATCGCCG CAACCTCAAG CCGTGATGAA CTCCCCCAAA TCGAACCTCT TAGCGGAAAA
CTGAGTCTTG TCGGCAAGCT ATATCAAAAA CAAACCAATC CTTTAAGCCA TGCCTTAATG
GCAGAAGCCG GAACACACAT TCGTATCCAA AATCTTAATA TTCCTGAAAT AACTCAGCTA
GTAGGCCATC CTTTAGTAAC GGCAGTACTG CAACCTGATC AACTCCCCAA CCTTGAGTTA
GCTCACCCTT GGCAACCATT TCCACTCTCG GCGCAAAAAC ATTGGGGTTA TGCATTGCAG
TGGTTTTCAA TGGCTGCGGT ATTTGCGGGC CTGATGCTGT GGCAAGGGGT TAAGTATGTA
AAACATCATC ACAGTGCCAA CTCTATGGGT AAATAG
 
Protein sequence
MRYPYCLLNK LTVFLLILTV TVFVILVKLG LWQLHRGEEK ALLLAQMESR QALAPLTFKQ 
LLQKIHLEDV TGYRLSITAS PANAQIWLLD NQVYQGQVGY LAFQALEVEP EKPWLLVELG
FIAATSSRDE LPQIEPLSGK LSLVGKLYQK QTNPLSHALM AEAGTHIRIQ NLNIPEITQL
VGHPLVTAVL QPDQLPNLEL AHPWQPFPLS AQKHWGYALQ WFSMAAVFAG LMLWQGVKYV
KHHHSANSMG K