Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_3786 |
Symbol | |
ID | 5081070 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | + |
Start bp | 4395712 |
End bp | 4396467 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640500999 |
Product | hypothetical protein |
Protein accession | YP_001185292 |
Protein GI | 146294868 |
COG category | [S] Function unknown |
COG ID | [COG3346] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGATATC CTTACTGTCT GCTGAATAAA TTAACCGTTT TTTTGTTGAT CTTGACTGTG ACTGTATTCG TGATTCTGGT CAAGCTAGGG CTATGGCAAC TCCATCGCGG AGAAGAAAAA GCCTTGTTAT TAGCTCAAAT GGAATCCAGA CAAGCCTTAG CGCCGCTGAC CTTTAAACAA CTTTTACAAA AAATCCATCT AGAAGATGTC ACAGGTTATC GCCTCAGTAT CACTGCCTCA CCTGCCAATG CGCAAATCTG GCTACTCGAC AATCAAGTCT ATCAGGGGCA AGTGGGATAT CTAGCATTTC AAGCTCTGGA AGTTGAGCCG GAAAAACCTT GGCTACTGGT TGAATTAGGC TTTATCGCCG CAACCTCAAG CCGTGATGAA CTCCCCCAAA TCGAACCTCT TAGCGGAAAA CTGAGTCTTG TCGGCAAGCT ATATCAAAAA CAAACCAATC CTTTAAGCCA TGCCTTAATG GCAGAAGCCG GAACACACAT TCGTATCCAA AATCTTAATA TTCCTGAAAT AACTCAGCTA GTAGGCCATC CTTTAGTAAC GGCAGTACTG CAACCTGATC AACTCCCCAA CCTTGAGTTA GCTCACCCTT GGCAACCATT TCCACTCTCG GCGCAAAAAC ATTGGGGTTA TGCATTGCAG TGGTTTTCAA TGGCTGCGGT ATTTGCGGGC CTGATGCTGT GGCAAGGGGT TAAGTATGTA AAACATCATC ACAGTGCCAA CTCTATGGGT AAATAG
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Protein sequence | MRYPYCLLNK LTVFLLILTV TVFVILVKLG LWQLHRGEEK ALLLAQMESR QALAPLTFKQ LLQKIHLEDV TGYRLSITAS PANAQIWLLD NQVYQGQVGY LAFQALEVEP EKPWLLVELG FIAATSSRDE LPQIEPLSGK LSLVGKLYQK QTNPLSHALM AEAGTHIRIQ NLNIPEITQL VGHPLVTAVL QPDQLPNLEL AHPWQPFPLS AQKHWGYALQ WFSMAAVFAG LMLWQGVKYV KHHHSANSMG K
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