Gene Sputcn32_3775 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_3775 
Symbol 
ID5081059 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand- 
Start bp4381860 
End bp4382819 
Gene Length960 bp 
Protein Length319 aa 
Translation table11 
GC content43% 
IMG OID640500988 
Productbiotin--protein ligase 
Protein accessionYP_001185281 
Protein GI146294857 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0340] Biotin-(acetyl-CoA carboxylase) ligase 
TIGRFAM ID[TIGR00121] birA, biotin-[acetyl-CoA-carboxylase] ligase region
[TIGR00122] BirA biotin operon repressor domain 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value0.00231404 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTGATA ACTGGGTAAG AAAGCGTGAA ATTTTAACGC TATTATCTAG CGAGCATTTT 
GTCTCGGGCG AACAGCTTGC GAGCGAGTTA GGCATATCTC GTGCTGCTGT GAGTAAACAT 
ATAGATGCGT TAGAAACCTA TGGTGTTGCA ATTTATAGTG TCAAAGGTCG TGGCTATAAA 
CTTGCGAATC CGATTTCATT GATTGATGCG TCACGTTTAG TGCAATCGAT TGATCATCGC 
TGTTTTTATT TTGATGAAAT TCCAAGCACT AATGGATTTA TGCTCAGTCA CATAAACGAG 
CTGAAGAGTG GAGATGTTTG TGTAGCCGAG TATCAAGCGG CAGGTCGAGG ACGTCGAGGA 
CGAACTTGGG TGTCGCCCTA TGGCCATCAT TTGTATTTTT CACTATTTTG GTCATTTCCA 
CAGGGGATGG CGCAGGCAAT GGGCTTGAGT TTAGTCGTAG CCTGTACGTT GGTTGAAGTA 
CTTAAATCCT ATGGCGTTGA GAATATTGGC GTTAAGTGGC CCAATGATAT CTATTTGGAT 
CATAAAAAAC TGGCTGGGAT TTTAATTGAA ATGGCAGGGC AAGCGGATAG CGAGTGCCAG 
CTTATTATCG GAATTGGCGT CAATATGGCG ATGTCTGAGG ATCATGGAAA AGGAATAGAC 
CAACCTTGGA GTGATCTATC AACATTAGCG ACTATGCCAG ATAAGACAGA CCTAGTGATT 
GAATTACAAA AACAACTTAA GCGAGATATT CAGTTATTTG AACGTGAAGG GCTGAATGCA 
TTTAAAACGC GATGGCAAGC TGCAGATTTA TTTTATGGTA AACCAATCCG TTTACTCATG 
GGGGAAAATC ATATTGATGG CATTTGCATG GGCGTAGATG CGCAAGGGGC GGTATTACTC 
GACACCGCCG ATGGTATTCA AGCATTTATC GGCGGAGAAA TTAGTCTTAG ACCCCGTTAG
 
Protein sequence
MSDNWVRKRE ILTLLSSEHF VSGEQLASEL GISRAAVSKH IDALETYGVA IYSVKGRGYK 
LANPISLIDA SRLVQSIDHR CFYFDEIPST NGFMLSHINE LKSGDVCVAE YQAAGRGRRG 
RTWVSPYGHH LYFSLFWSFP QGMAQAMGLS LVVACTLVEV LKSYGVENIG VKWPNDIYLD 
HKKLAGILIE MAGQADSECQ LIIGIGVNMA MSEDHGKGID QPWSDLSTLA TMPDKTDLVI 
ELQKQLKRDI QLFEREGLNA FKTRWQAADL FYGKPIRLLM GENHIDGICM GVDAQGAVLL 
DTADGIQAFI GGEISLRPR