| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_3771 |
|---|
| Symbol | |
|---|
| ID | 5081051 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella putrefaciens CN-32 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009438 |
|---|
| Strand | - |
|---|
| Start bp | 4377794 |
|---|
| End bp | 4378345 |
|---|
| Gene Length | 552 bp |
|---|
| Protein Length | 183 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 640500980 |
|---|
| Product | NusG antitermination factor |
|---|
| Protein accession | YP_001185277 |
|---|
| Protein GI | 146294853 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0250] Transcription antiterminator |
|---|
| TIGRFAM ID | [TIGR00922] transcription termination/antitermination factor NusG |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.0000000919 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTGAAG CTAAAGAAGC TAAAAAAAGA TGGTATGTAG TGCAGGCATT CTCAGGCTAT
GAAGGCCGAG TTTGTAAGTC ACTGATTGAA TACATTAAGA TGCACGGCAT GGAGCAGTAC
TTCGGTGAAG TATTAGTTCC GACTGAAGAA GTTATCGAAA TGCGTGCAGG TCAGCGTCGT
AAGAGTGAGC GTAAGTTTTT CCCTGGTTAT GTGTTAGTCC AGATGGAAAT GAACGATGAC
AGCTGGCATT TAGTCAAAAG CATCCCGCGT GTTTTAGGCT TTATTGGCGG AACCTCTGAT
CGTCCAGCCC CAATTTCAGA TAAAGAAGCC GATGCTATTT TGCGTCGCTT GCAAGAAACC
ACGGCTTCAC CAACTCACCG TGTTATTTTC GAACCGGGCG AAGTGGTGCG TGTCTGTGAC
GGTCCATTCG CTGACTTTAA CGGTACCGTT GAAGAAGTGG ACTACGACAA GAGCCGCGTA
AAAGTGTCAG TAATGATCTT TGGTCGTTCT ACACCAGTGG AGCTCGATTT TAGTCAGGTT
GAAAAAGGCT GA
|
|---|
| Protein sequence | MTEAKEAKKR WYVVQAFSGY EGRVCKSLIE YIKMHGMEQY FGEVLVPTEE VIEMRAGQRR
KSERKFFPGY VLVQMEMNDD SWHLVKSIPR VLGFIGGTSD RPAPISDKEA DAILRRLQET
TASPTHRVIF EPGEVVRVCD GPFADFNGTV EEVDYDKSRV KVSVMIFGRS TPVELDFSQV
EKG
|
|---|
| |