Gene Sputcn32_3770 details

Gene Information

• Locus tag: Sputcn32_3770
• Symbol: rplK
• ID: 5081050
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella putrefaciens CN-32
• Kingdom: Bacteria
• Replicon accession: NC_009438
• Strand: -
• Start bp: 4377238
• End bp: 4377666
• Gene Length: 429 bp
• Protein Length: 142 aa
• Translation table: 11
• GC content: 44%
• IMG OID: 640500979
• Product: 50S ribosomal protein L11
• Protein accession: YP_001185276
• Protein GI: 146294852
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0080] Ribosomal protein L11
• TIGRFAM ID: [TIGR01632] 50S ribosomal protein L11

Plasmid Coverage information

• Num covering plasmid clones: 1
• Plasmid unclonability p-value: 0.000000004485
• Plasmid hitchhiking: No
• Plasmid clonability: decreased coverage

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCAAAGA AGATTGATGC TTATATTAAG CTACAAGTAA AATCAGGTTC TGCGAACCCT 
TCACCACCAG TTGGTCCAGC TCTGGGTCAA AAAGGTGTGA ACATCATGGA ATTCTGTAAA 
GCGTTTAACG CCCGTACAGA AAAAATGGAA AAAGGCATGC CTATTCCTGT CGTGATCACT 
GTTTACAGTG ACCGTTCATT CACTTTTGAA ACTAAGACTC CGCCAGCGTC TTTCTTACTG 
AAGACTGCTG CAGGCCTGAA ATCAGGTTCT CCACGTCCTA ATACTCAGAA AGTTGGAACT 
ATCGCTCGCG CTAAGATTCA GGAAATTGCT GAAACTAAAG CTGCCGATAT GACTGGTGCT 
GACATTGAAG CGATGACTCG CTCAATCGAA GGTACTGCGC GTTCAATGGG TTTGGTTGTA 
GAGGATTAA 

 

Protein sequence

MAKKIDAYIK LQVKSGSANP SPPVGPALGQ KGVNIMEFCK AFNARTEKME KGMPIPVVIT 
VYSDRSFTFE TKTPPASFLL KTAAGLKSGS PRPNTQKVGT IARAKIQEIA ETKAADMTGA 
DIEAMTRSIE GTARSMGLVV ED