| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_3764 |
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| Symbol | rpsL |
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| ID | 5081044 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 4366215 |
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| End bp | 4366589 |
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| Gene Length | 375 bp |
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| Protein Length | 124 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640500973 |
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| Product | 30S ribosomal protein S12 |
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| Protein accession | YP_001185270 |
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| Protein GI | 146294846 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0048] Ribosomal protein S12 |
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| TIGRFAM ID | [TIGR00981] ribosomal protein S12, bacterial/organelle |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0000216882 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCAACTG TAAACCAGTT GGTACGTAAG CCACGCGCGC CAAAAGTCGA CAAGACTAAC
GTGCCTGCGT TGAATGCGTG CCCACAAAAG CGTGGTGTTT GTACACGTGT GTACACTACT
ACCCCTAAAA AACCTAACTC TGCACTACGT AAAGTAGCTC GTGTGCGTCT AACTAACGGT
TTCGAAGTAA CTTCGTACAT CGGCGGTGAA GGCCACAACC TGCAGGAACA CAGCGTGATC
TTAATCCGTG GTGGTCGTGT TAAAGACTTA CCAGGTGTTC GCTATCACAC TGTTCGTGGC
GCACTAGACT GTGCTGGCGT GAGCTCACGT CGCCAAGGTC GTTCTAAGTA CGGTGCAAAA
CGTCCTAAGT CTTAA
|
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| Protein sequence | MATVNQLVRK PRAPKVDKTN VPALNACPQK RGVCTRVYTT TPKKPNSALR KVARVRLTNG
FEVTSYIGGE GHNLQEHSVI LIRGGRVKDL PGVRYHTVRG ALDCAGVSSR RQGRSKYGAK
RPKS
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