Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_3756 |
Symbol | rplB |
ID | 5081036 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | - |
Start bp | 4359154 |
End bp | 4359978 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640500965 |
Product | 50S ribosomal protein L2 |
Protein accession | YP_001185262 |
Protein GI | 146294838 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0090] Ribosomal protein L2 |
TIGRFAM ID | [TIGR01171] ribosomal protein L2, bacterial/organellar |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.000000243067 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAGTTA TTAAGTGTAA GCCAACCTCT CCAGGTCGTC GCCACGTAGT TAAAGTGGTG AACACTGACC TGCATAAGGG TAAACCCTTT GCTGGCCTGT TGGCGAAAAA ATCTAAAAGT GGTGGCCGTA ACAATACTGG CCGTATCACT GTCCGTCACG TAGGTGGTGG TCATAAGCAG CATTATCGTC TAATCGACTT CAAACGCGAT AAAGACGGTA TCCCTGCAAA GATTGAGCGT CTGGAATACG ATCCAAACCG CACAGCTAAC ATCGCGTTAG TATTGTATGC GGATGGTGAG CGTCGTTACA TCCTTGCTGC TAAAGGTATG CAAGCTGGCG ATAAGATCCA GTCTGGTGTT GAAGCCGAAA TTAAAACCGG TAACGCAATG CCACTGCGCA ACATCCCAGT AGGTTCTGTA GTACACGCAG TAGAAATGAA GCCTGGTAAA GGTGCTCAGA TCGCTCGTTC TGCAGGTGCT TATGTACAAG TTGTTGCTCG TGATGGTGCA TATGCCACTC TACGTCTTCG CTCTGGCGAA ATGCGTAAAG TGCCAGTTGA TTGCCGCGCG ACATTTGGTG AAGTTGGTAA TGCTGAACAC ATGCTACGCC AGTTAGGTAA AGCAGGTGCT AAGCGCTGGA GAGGCATACG TCCTACAGTG CGTGGTGTTG CAATGAACCC AGTAGACCAT CCACACGGTG GTGGTGAAGG CCGTACTTCT GGTGGTCGTC ACCCAGTGAC TCCATGGGGT GTGCCAACTA AGGGTTATAA AACTCGTAGT AACAAGCGCA CTGACAAGTA CATCGTACGT CGTCGTAATA AATAG
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Protein sequence | MAVIKCKPTS PGRRHVVKVV NTDLHKGKPF AGLLAKKSKS GGRNNTGRIT VRHVGGGHKQ HYRLIDFKRD KDGIPAKIER LEYDPNRTAN IALVLYADGE RRYILAAKGM QAGDKIQSGV EAEIKTGNAM PLRNIPVGSV VHAVEMKPGK GAQIARSAGA YVQVVARDGA YATLRLRSGE MRKVPVDCRA TFGEVGNAEH MLRQLGKAGA KRWRGIRPTV RGVAMNPVDH PHGGGEGRTS GGRHPVTPWG VPTKGYKTRS NKRTDKYIVR RRNK
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