Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_3741 |
Symbol | rpmD |
ID | 5079128 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | - |
Start bp | 4353182 |
End bp | 4353364 |
Gene Length | 183 bp |
Protein Length | 60 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640500950 |
Product | 50S ribosomal protein L30 |
Protein accession | YP_001185247 |
Protein GI | 146294823 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1841] Ribosomal protein L30/L7E |
TIGRFAM ID | [TIGR01308] ribosomal protein L30, bacterial/organelle |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000000000717278 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAACTA AAACTGTAAA AGTTACTCAG ACTAAGAGCG GTATCGGTCG TTTACCGAAG CACCGTGCAA CCTTAACAGG TTTAGGTCTG CGTCGCATTG GTCACACTGT TGAATTAGAA GATACTCCTT CTGTTCGCGG TATGATCAAC AAGGTCTACT ACATGGTTAA GGTGGAGGAT TAA
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Protein sequence | MATKTVKVTQ TKSGIGRLPK HRATLTGLGL RRIGHTVELE DTPSVRGMIN KVYYMVKVED
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