Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_3730 |
Symbol | |
ID | 5079117 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | + |
Start bp | 4346922 |
End bp | 4347122 |
Gene Length | 201 bp |
Protein Length | 66 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 640500940 |
Product | Heme exporter protein D (CcmD) |
Protein accession | YP_001185237 |
Protein GI | 146294813 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3114] Heme exporter protein D |
TIGRFAM ID | [TIGR03141] heme exporter protein CcmD |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.0522398 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAATTCG ATTCTATCAG TGATTTTTTT AATATGGGCG GCTATGCATT CTATGTATGG CTTTCCTACG GAGTGACGTT CTTCTGCCTA TCGGTACTCA TCATAACAAG CGCACGCCAA AAGCGTAAGG TTCTGATTGA AATCGCTAAA AAGATGAATC GTGAAGAGCG CCTCAAAGAA ACTAGGAGTA CCAAATCGTG A
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Protein sequence | MQFDSISDFF NMGGYAFYVW LSYGVTFFCL SVLIITSARQ KRKVLIEIAK KMNREERLKE TRSTKS
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