| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_3728 |
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| Symbol | |
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| ID | 5079115 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 4345488 |
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| End bp | 4346174 |
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| Gene Length | 687 bp |
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| Protein Length | 228 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640500938 |
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| Product | heme exporter protein CcmB |
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| Protein accession | YP_001185235 |
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| Protein GI | 146294811 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG2386] ABC-type transport system involved in cytochrome c biogenesis, permease component |
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| TIGRFAM ID | [TIGR01190] heme exporter protein CcmB |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.77019 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAAGAG GCATCAGCTT TACTCAGGCA TTTTTTACCT TGTTACAGCG GGATCTAAAA
ATTGCCGTAC GTCACCGCGG TGATATTTTT AACCCATTGT TATTTTTTAT TATGGTTGTC
ACTCTATTCC CCCTTGGTAT TGGTCCAGAG CCGCAAATGC TAGCACGCGT TGCTCCCGGT
ATTATTTGGG TTGCAGCATT ATTAGCCTCC ATGCTATCGC TTGAACGACT TTTTAAAGCA
GATTTTAGCG ATGGTAGCTT AGAGCAAATG CTGCTGAGTC CACAGCCATT ATCAATTCTT
GTATTAGCAA AAGTATTGGC ACATTGGATA TTGACTGGCG TTCCATTAAT TATCATTGCA
CCGCTACTCG CGGTATTGCT AAATTTAGAT ACCAATAGCT ATGGTGCACT GATTGCAACC
TTAACGCTGG GCACACCTGT TTTATCACTA TTAGGTGCGA TTGGCGTAGC TCTAACCGTC
GGATTACGCA AAGGCGGCGT TTTGCTCAGC CTACTGATTT TACCCCTGTA TATCCCAGTT
CTCATCTTCG CAACGAGTGC AATCGATGCG GCGGGAATGA ATTTACCCTA TGATGGTCAG
CTCGCTATAA TAGGCGCTAT GTTGATCGGT TCGTTAACCT TAGCACCCTT TGCAATCGGT
GCATCTCTGC GAGTGAGTAC TAACTAA
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| Protein sequence | MKRGISFTQA FFTLLQRDLK IAVRHRGDIF NPLLFFIMVV TLFPLGIGPE PQMLARVAPG
IIWVAALLAS MLSLERLFKA DFSDGSLEQM LLSPQPLSIL VLAKVLAHWI LTGVPLIIIA
PLLAVLLNLD TNSYGALIAT LTLGTPVLSL LGAIGVALTV GLRKGGVLLS LLILPLYIPV
LIFATSAIDA AGMNLPYDGQ LAIIGAMLIG SLTLAPFAIG ASLRVSTN
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