Gene Sputcn32_3727 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_3727 
Symbol 
ID5079114 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp4344826 
End bp4345476 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content41% 
IMG OID640500937 
Productcytochrome c biogenesis protein CcmA 
Protein accessionYP_001185234 
Protein GI146294810 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG4133] ABC-type transport system involved in cytochrome c biogenesis, ATPase component 
TIGRFAM ID[TIGR01189] heme ABC exporter, ATP-binding protein CcmA 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.549494 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACAAATA TAACTTCAGT AAACACACTG GTATCAGCGA GCAAGCTGAC ATGTATCCGC 
GAAGAACGTA TCCTGTTTGA TGAGTTAAGT TTTAATATTA ATGCTGGTGA TATCGTCCAA
ATTGAAGGCC CTAACGGCGC AGGCAAAACG AGCTTATTGC GTATTTTAGC GGGGCTTTCG
CGTCCCTATG CAGGACAAAC CTTTTATCTT AGTGAAGATA TCAATCGTTG CCGTGACGAG
TACAACGAAG ACCTACTGTA TTTAGGCCAC CTTGCAGGCG TTAAATGTGA ATTAACAGCC
GAAGAGAACC TTAATTTCAA TTTAAGAATC AGTGGTTATG ATGAATTCGA CACAGCCTCT
ATCTTAGCCA AAGTTAATTT AACTGGATTT GAAGAAGCGC TGGCTGGCCA TTTATCTGCA
GGTCAGCATC GTAGAACTGC ACTGGCAAGA CTTTGGCATA GCAACTGTAA AATTTGGATC
CTTGACGAAC CTTTTACCGC TATTGATAAA AAAGGTGTTG AAGAACTTGA GCAACTGTTT
ATTGAGCATG CAGATAATGG TGGATGCGTT ATTCTTACCA CTCACCAAGA TATGAGCATT
ATCACAGATG ATAGGCTTCG TAAAATTCGT CTAGATTATC GCTTCATATA A
 
Protein sequence
MTNITSVNTL VSASKLTCIR EERILFDELS FNINAGDIVQ IEGPNGAGKT SLLRILAGLS 
RPYAGQTFYL SEDINRCRDE YNEDLLYLGH LAGVKCELTA EENLNFNLRI SGYDEFDTAS
ILAKVNLTGF EEALAGHLSA GQHRRTALAR LWHSNCKIWI LDEPFTAIDK KGVEELEQLF
IEHADNGGCV ILTTHQDMSI ITDDRLRKIR LDYRFI