Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_3727 |
Symbol | |
ID | 5079114 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | + |
Start bp | 4344826 |
End bp | 4345476 |
Gene Length | 651 bp |
Protein Length | 216 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 640500937 |
Product | cytochrome c biogenesis protein CcmA |
Protein accession | YP_001185234 |
Protein GI | 146294810 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG4133] ABC-type transport system involved in cytochrome c biogenesis, ATPase component |
TIGRFAM ID | [TIGR01189] heme ABC exporter, ATP-binding protein CcmA |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.549494 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACAAATA TAACTTCAGT AAACACACTG GTATCAGCGA GCAAGCTGAC ATGTATCCGC GAAGAACGTA TCCTGTTTGA TGAGTTAAGT TTTAATATTA ATGCTGGTGA TATCGTCCAA ATTGAAGGCC CTAACGGCGC AGGCAAAACG AGCTTATTGC GTATTTTAGC GGGGCTTTCG CGTCCCTATG CAGGACAAAC CTTTTATCTT AGTGAAGATA TCAATCGTTG CCGTGACGAG TACAACGAAG ACCTACTGTA TTTAGGCCAC CTTGCAGGCG TTAAATGTGA ATTAACAGCC GAAGAGAACC TTAATTTCAA TTTAAGAATC AGTGGTTATG ATGAATTCGA CACAGCCTCT ATCTTAGCCA AAGTTAATTT AACTGGATTT GAAGAAGCGC TGGCTGGCCA TTTATCTGCA GGTCAGCATC GTAGAACTGC ACTGGCAAGA CTTTGGCATA GCAACTGTAA AATTTGGATC CTTGACGAAC CTTTTACCGC TATTGATAAA AAAGGTGTTG AAGAACTTGA GCAACTGTTT ATTGAGCATG CAGATAATGG TGGATGCGTT ATTCTTACCA CTCACCAAGA TATGAGCATT ATCACAGATG ATAGGCTTCG TAAAATTCGT CTAGATTATC GCTTCATATA A
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Protein sequence | MTNITSVNTL VSASKLTCIR EERILFDELS FNINAGDIVQ IEGPNGAGKT SLLRILAGLS RPYAGQTFYL SEDINRCRDE YNEDLLYLGH LAGVKCELTA EENLNFNLRI SGYDEFDTAS ILAKVNLTGF EEALAGHLSA GQHRRTALAR LWHSNCKIWI LDEPFTAIDK KGVEELEQLF IEHADNGGCV ILTTHQDMSI ITDDRLRKIR LDYRFI
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