| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_3711 |
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| Symbol | |
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| ID | 5079095 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 4318418 |
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| End bp | 4319497 |
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| Gene Length | 1080 bp |
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| Protein Length | 359 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640500918 |
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| Product | type IV pilus assembly protein PilM |
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| Protein accession | YP_001185218 |
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| Protein GI | 146294794 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4972] Tfp pilus assembly protein, ATPase PilM |
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| TIGRFAM ID | [TIGR01175] type IV pilus assembly protein PilM |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.480813 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTTTCAA ATTTATGGAA GCGTCAGGCT CCGCAGATGG TGGGAATCGA CATTGGTTCA
CATGAAGTTA AGGCCATTTT GCTGGGTAAG ACTGCTGATG GATACAAAAT ACTCAGTCAT
GCAGCGGTCC CTGTAAAAAA GGGAGCCATC AACGATCATG ATATTCGTGA TGTTGATGCC
GTTGTTGAAT GTTTAAGGCA AGTGAAGCGT ATCTTACCTA AATCGGTGAA ATATGCGGCT
GTTGCTGTAT CTGGTTCAGC AGTGATGACA AAAGTTATCT ATATGGATGC TTCGCTGAGC
GAGGAAGAAA TGGAAGCCCA GATAGAAATA GAAGCCGATA ACTTAATTCC CTATTCCCTG
GATGAAGTGA GCATTGATTT TGAAACCCTC AATGTAAATA GTACCGATCC TTCTAAGGTT
GATGTGCTAT TGAGCGCCTG TCGTACCGAT AATATAGATG TCAGAGTCGA TGCATTAGAT
ACGGTTGAAC TTGAGACGAA AGTTGTTGAT GTTGAGGGAT ATGCACTTGG GCGCTCTGCA
GAGTTAATCC TAGGTCAGTT ACCAGAAGGA GCGAGGCAAA AAGCCGTTGC ACTGGTTGAT
ATTGGCGCCA ATATGACGAC TTTTTCTGTA GTAGAGTCTG GTGAAACAAC CTTTATTCGT
GAACAAGCCT TTGGTGGTGA GTTGTTTACT CAGTCAATAC TGTCCTTTTA TGGTATGTCC
TATGAACAAG CGGAAAAAGC CAAGATAGAA GGTGACTTAC CACGTAATTA TATGTTTGAA
GTGTTATCAC CTTTTCAAAC TCAGCTACTA CAACAAGTTA AACGCACGCT GCAAATCTAT
TGTACATCCA GCGGTAGAGA TAAAGTCGAT TATCTGGTTT TATGTGGTGG GACCTCTAAG
TTGGAAGGAA TGGCTAATTT ATTAATCAAT GAATTAGGTG TTCATACTAT CATCGCCGAT
CCTTTTCAAG GATGTTTACA CGCAGACGAA TCAATCAAAC ATATCCTGCA ACCTAACATC
AGTAAATATA TGGTTGCCTG CGGCTTAGCA CTGAGGAGTT ACGGTCAATG GCGAACATAA
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| Protein sequence | MLSNLWKRQA PQMVGIDIGS HEVKAILLGK TADGYKILSH AAVPVKKGAI NDHDIRDVDA
VVECLRQVKR ILPKSVKYAA VAVSGSAVMT KVIYMDASLS EEEMEAQIEI EADNLIPYSL
DEVSIDFETL NVNSTDPSKV DVLLSACRTD NIDVRVDALD TVELETKVVD VEGYALGRSA
ELILGQLPEG ARQKAVALVD IGANMTTFSV VESGETTFIR EQAFGGELFT QSILSFYGMS
YEQAEKAKIE GDLPRNYMFE VLSPFQTQLL QQVKRTLQIY CTSSGRDKVD YLVLCGGTSK
LEGMANLLIN ELGVHTIIAD PFQGCLHADE SIKHILQPNI SKYMVACGLA LRSYGQWRT
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