Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_3699 |
Symbol | |
ID | 5079033 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | - |
Start bp | 4308327 |
End bp | 4309007 |
Gene Length | 681 bp |
Protein Length | 226 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640500906 |
Product | phosphoglycolate phosphatase |
Protein accession | YP_001185206 |
Protein GI | 146294782 |
COG category | [R] General function prediction only |
COG ID | [COG0546] Predicted phosphatases |
TIGRFAM ID | [TIGR01449] 2-phosphoglycolate phosphatase, prokaryotic [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED [TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTGGGAAC AAATTAAGGC AATCGCGTTT GATCTTGATG GAACATTAAT TGATAGTGTT CCTGACCTTG CAGTAGCGAC CCAAGAGGCT TTAGCTGAAC TTGGTTTAGC AACGTGTTCT GAGGCACAAG TGCGTACTTG GGTTGGTAAT GGCGCTGAAA TGTTAATGCG CCGCGCCATG ACTAATGCAC TCGGTACCGA CGTAGAGCAG GCTGCACTCG ATGCGGCGAT GCCAATTTTT ATGCATCACT ACCAAGAGAA CCTTGAGAAG CACAGTGCGC TCTATGGGGA TGTGCATCAA GTGCTGCAAA CCCTGTTAGA TGCAGGTTTT AAGCTAGCGG TTGTCACTAA TAAACCCTAC CGCTTTACGT TACCTTTGCT TGAAGCCTTC AATATAAACA GCTTTTTTAG CTTGGTATTA GGCGGTGATT CGCTGTCAAA GATGAAGCCT GATCCTTTAC CGCTGCAGCA CCTACTGAAG GAATGGCAGT TAGATAAAGC CGAGTTATTG ATGGTTGGCG ACTCTAAAAA TGACATTTTA GCGGCGAAAG CGGCAGGTGT TGCATCAATC GGCTTGACCT ACGGCTATAA CTACGGTGAA GATATTGGGC TCGCAGGCCC AGATGCTGTC TGCGAGCAAT TTAGTGATAT TTTGAACTGG ATAAATCCAA CAACGCGTTA A
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Protein sequence | MWEQIKAIAF DLDGTLIDSV PDLAVATQEA LAELGLATCS EAQVRTWVGN GAEMLMRRAM TNALGTDVEQ AALDAAMPIF MHHYQENLEK HSALYGDVHQ VLQTLLDAGF KLAVVTNKPY RFTLPLLEAF NINSFFSLVL GGDSLSKMKP DPLPLQHLLK EWQLDKAELL MVGDSKNDIL AAKAAGVASI GLTYGYNYGE DIGLAGPDAV CEQFSDILNW INPTTR
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