Gene Sputcn32_3699 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_3699 
Symbol 
ID5079033 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp4308327 
End bp4309007 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content46% 
IMG OID640500906 
Productphosphoglycolate phosphatase 
Protein accessionYP_001185206 
Protein GI146294782 
COG category[R] General function prediction only 
COG ID[COG0546] Predicted phosphatases 
TIGRFAM ID[TIGR01449] 2-phosphoglycolate phosphatase, prokaryotic
[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGGGAAC AAATTAAGGC AATCGCGTTT GATCTTGATG GAACATTAAT TGATAGTGTT 
CCTGACCTTG CAGTAGCGAC CCAAGAGGCT TTAGCTGAAC TTGGTTTAGC AACGTGTTCT
GAGGCACAAG TGCGTACTTG GGTTGGTAAT GGCGCTGAAA TGTTAATGCG CCGCGCCATG
ACTAATGCAC TCGGTACCGA CGTAGAGCAG GCTGCACTCG ATGCGGCGAT GCCAATTTTT
ATGCATCACT ACCAAGAGAA CCTTGAGAAG CACAGTGCGC TCTATGGGGA TGTGCATCAA
GTGCTGCAAA CCCTGTTAGA TGCAGGTTTT AAGCTAGCGG TTGTCACTAA TAAACCCTAC
CGCTTTACGT TACCTTTGCT TGAAGCCTTC AATATAAACA GCTTTTTTAG CTTGGTATTA
GGCGGTGATT CGCTGTCAAA GATGAAGCCT GATCCTTTAC CGCTGCAGCA CCTACTGAAG
GAATGGCAGT TAGATAAAGC CGAGTTATTG ATGGTTGGCG ACTCTAAAAA TGACATTTTA
GCGGCGAAAG CGGCAGGTGT TGCATCAATC GGCTTGACCT ACGGCTATAA CTACGGTGAA
GATATTGGGC TCGCAGGCCC AGATGCTGTC TGCGAGCAAT TTAGTGATAT TTTGAACTGG
ATAAATCCAA CAACGCGTTA A
 
Protein sequence
MWEQIKAIAF DLDGTLIDSV PDLAVATQEA LAELGLATCS EAQVRTWVGN GAEMLMRRAM 
TNALGTDVEQ AALDAAMPIF MHHYQENLEK HSALYGDVHQ VLQTLLDAGF KLAVVTNKPY
RFTLPLLEAF NINSFFSLVL GGDSLSKMKP DPLPLQHLLK EWQLDKAELL MVGDSKNDIL
AAKAAGVASI GLTYGYNYGE DIGLAGPDAV CEQFSDILNW INPTTR