Gene Sputcn32_3698 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_3698 
Symbol 
ID5079032 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp4307284 
End bp4308282 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content48% 
IMG OID640500905 
Producttryptophanyl-tRNA synthetase 
Protein accessionYP_001185205 
Protein GI146294781 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0180] Tryptophanyl-tRNA synthetase 
TIGRFAM ID[TIGR00233] tryptophanyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCAAAC CCATAGTACT CAGCGGTGCA CAGCCGTCCG GCGAATTAAC CATAGGTAAC 
TACATGGGTG CATTGCGTCA ATGGGTGGCG ATGCAAGATA GCCACGACTG CTTGTATTGT
GTGGTCGACT TGCATGCCAT TACCGTGCGC CAAGATCCTA AAACCCTGCG CGAAGCCTGT
TTAGATACCT TGGCCCTGTA TTTGGCCTGT GGTGTGGATC CTAAAAAAAG CACAGTGTTT
ATCCAATCTC AGGTACCACA GCACACCCAA TTGGGCTGGG CATTAAACTG CTATACCCAA
ATGGGTGAGT TGAGCCGCAT GACGCAGTTT AAGGATAAGT CACAAAAGCA TGCTAACAAC
ATCAACGTGG GTTTGTTTGG CTACCCGGTT CTGATGGCGG CGGATATTTT GATTTATCAA
GCGAACGAAA TTCCCGTTGG CCAAGATCAG AAACAACACC TAGAGTTAAC ACGCGATATC
GCGACTCGCT TTAATAATGC CTACGGTGAC ACTTTTACCA TTCCTGAGCC ATTTATCCCT
GAACATGGTG CTAAGGTGAT GTCGCTGCAG GAGCCGCTGA AGAAGATGTC TAAGTCGGAC
GAAAACCGTA ATAACGTTAT CGGCCTGCTA GAAGATCCAA AATCAGTGCT GAAAAAGCTG
AAAAAAGCCA TGACGGATAG CGATGAGCCG CCAGTCGTAC GTTTCGATTT GGATAATAAA
CCGGGCGTTT CTAACCTACT GAGTTTAATG TCGGGCGTGA CGGGGCAAAG TATTGCCAGC
CTAGAAGCCG AGTTTGAAGG CAAAATGTAT GGACACTTAA AAGTAGCAGC AGGTGAAGCG
GTTGTGGGGA TGTTAGAGCC ACTGCAGGAG CGTTACCGCG CAATTCGAGC CGATCGCGCT
TACTTAGATC AAGTGATGAA AGCGGGCGCC GAGAATGCAC AGGCGCGCGC CGAAGTGACG
CTGAAAAAAG TCTATGAGAA AATTGGTTTA TTAGTGTAA
 
Protein sequence
MTKPIVLSGA QPSGELTIGN YMGALRQWVA MQDSHDCLYC VVDLHAITVR QDPKTLREAC 
LDTLALYLAC GVDPKKSTVF IQSQVPQHTQ LGWALNCYTQ MGELSRMTQF KDKSQKHANN
INVGLFGYPV LMAADILIYQ ANEIPVGQDQ KQHLELTRDI ATRFNNAYGD TFTIPEPFIP
EHGAKVMSLQ EPLKKMSKSD ENRNNVIGLL EDPKSVLKKL KKAMTDSDEP PVVRFDLDNK
PGVSNLLSLM SGVTGQSIAS LEAEFEGKMY GHLKVAAGEA VVGMLEPLQE RYRAIRADRA
YLDQVMKAGA ENAQARAEVT LKKVYEKIGL LV