Gene Sputcn32_3687 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_3687 
Symbol 
ID5079020 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand+ 
Start bp4298383 
End bp4298994 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content43% 
IMG OID640500893 
ProductTetR family transcriptional regulator 
Protein accessionYP_001185194 
Protein GI146294770 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCACACAA AGCACTGCAT GCACATAGCG AAAAGCCCGC GGGCTGTGCT CAAGGTTCTC 
CACGCTTTTA AGGAAATGCT GAAACAGCAA GATTATCGTG ATATTGCAGT GGCTGATATT 
GCCTACAAAG CCGATGTAGG CCGCACGACG TTTTATCGCT ACTTCAAGCG TAAGCTGGAT 
ATTCTTATTG CACTCCATCA AAATATTTTT GAAGATATCT TCGCAGATCT TCAGTCAGCC 
GAAGACTGGC TTTCAACTAA CACGCCACCC TCATTGGAAA AACTGCTTAT TACTTTTAGC 
CGAAACAGCA TGTTTCGCCG TTCCATGTCA TTTAGACTTG GTAGCGATCT CGATGCCGCA 
ACGAAACAAT TACAAACTAA ACTTGTGCAA CATATCGAAA ATAAATTGGT CAACACCTTC 
AACACTGACG AATTTATTAT CCCAAGCCAC ACGTTGGCCC ACAGCATAGC CGCTCTTTAT 
TTAAGCCAAA TTCAACAGCT TATTGCCAGT CCTCATCCCT GTCCTACACA ACAAGCCAAG 
TACTTACATC TGCTTACGCG GGGTATCATT TTAGCTGCGT TAACGAAAAG AAACGCATAT 
CTAAACCAAT GA
 
Protein sequence
MHTKHCMHIA KSPRAVLKVL HAFKEMLKQQ DYRDIAVADI AYKADVGRTT FYRYFKRKLD 
ILIALHQNIF EDIFADLQSA EDWLSTNTPP SLEKLLITFS RNSMFRRSMS FRLGSDLDAA 
TKQLQTKLVQ HIENKLVNTF NTDEFIIPSH TLAHSIAALY LSQIQQLIAS PHPCPTQQAK 
YLHLLTRGII LAALTKRNAY LNQ