Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_3682 |
Symbol | |
ID | 5079015 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | - |
Start bp | 4291198 |
End bp | 4293570 |
Gene Length | 2373 bp |
Protein Length | 790 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640500888 |
Product | hypothetical protein |
Protein accession | YP_001185189 |
Protein GI | 146294765 |
COG category | [C] Energy production and conversion |
COG ID | [COG1032] Fe-S oxidoreductase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCAAGTTG AATCCACACT TTTTAGTTAT CCCAAATACT GGGCCGAGTG CTATGGCACG GCACCTTTCT TACCTATGTC CCGTAAGGAG ATGGATAAGC TCGGCTGGGA TAGCTGTGAC ATTATTATTG TCACAGGTGA TGCTTATGTG GATCACCCAA GCTTTGGTAT GGCTGTTATT GGCCGTATGT TAGAAGCCCA AGGTTATCGC GTGGGGATTA TTTCTCAGCC CGATTGGTCG AGCAAAGACG CTTTTATGCA GCTTGGACGC CCGAATCTGT TTTTTGGTGT CACCGCGGGT AACATGGATT CCATGATTAA TCGCTACACC GCTGACCGTC GTATCCGCAC CGATGATGCT TATACTCCAG ATGATATCGG TGGCAAGCGC CCCGACCGCG CCGTGACGGT TTATACCCAG CGTTGTAAAG AAGCCTTTAA AGATGTGCCA GTCATTATTG GCGGAATTGA GGCAAGCCTT CGCCGGATCG CCCATTACGA TTATTGGTCC GATAAAGTGC GTCGCAGTGT GATTTTCGAT GCTAAGGCCG ACATTTTAAT GTATGGCAAT GCGGAGCGTC CGCTGGCTGA AGTGGCGCGT CGTTTAGCGG CGGGGGAGTC GATTAATGAC TTGCACGATG TACGTGGCAC TGCGGTAATT CGTAAAGAAC CTTTGCCTGA ATGGCGTGGT ATGGATTCAC GCAAAATCGA CCAATTGCAT AAGATTGATC CTATCCCTAA TCCCTATGGT GCCGATGATG TGGGTTGCGC TAATTTATCT GGCCCTTCGG ATGCAAAGAT TTTTGATAAC GATGCGCCAA AAGCTATCAG CGTGCAACCG CCACGCCCTA AGCCATGGGA TAAAACCTAT GTGCTGCTGC CAGCTTTTGA AAAGGTATCT GAGGACAAAT ATTTATACGC CCATGCCTCA CGGATTTTGC ACCAAGAGCA AAACCCGGGC TGCGCACGGG CGCTGTTCCA GCCCCACGGT GACCGTGGGG TGTGGGTCAA TCCGCCCGCT TGGCCGCTCA ATACCGACGA GATGGATGCG GTATTTGATT TACCCTATAA AAGGGTGCCA CACCCTGCCT ATGGTAAGGC GAAAATCCCC GCCTATGACA TGATCAAAAC CTCGATCAAC ATTATGCGCG GTTGCTTTGG TGGCTGTTCT TTCTGCTCGA TTACCGAACA TGAAGGGCGG ATTATTCAGA GCCGTTCGCA AGAATCTATT ATCAAAGAAA TCAAAGATAT TCAGGATAAA GTGCCCGGTT TTACTGGGGT AATTTCCGAT CTTGGCGGCC CCACTGCCAA CATGTATCGC CTCGGCTGTA CCAGCGAAAA AGCCGAGAAA ACCTGCCGCC GTTTGTCCTG CGTGTTCCCC TCGATTTGCG GCCATTTAGG CACAGATCAT AAGCACACTA TCGACTTGTA CCGCGCCGCC CGCGCCGTGC CCGGCATTAA GAAGATTTTG ATTGCCTCCG GTGTGCGTTA CGATTTGGCG ATCGAAGATC CTGCTTATGT TAAAGAGTTA GTGCAGCATC ATGTGGGCGG CTACTTAAAA ATCGCCCCTG AGCATACCGA GGAAGGGCCG CTCAGCAAGA TGATGAAACC CGGCATGGGC GCCTACGATA AATTTAAAGA ACTGTTCGAC AAGTATTCGA AGGAAGCGGG TAAAGAACAG TTCCTGATCC CTTATTTTAT ATCGGCGCAT CCTGGCACGA CCGACGAAGA CATGGTGAAT TTAGCGCTGT GGCTGAAGGA GCGTAAGTTT AAGCTCGACC AAGTGCAAAA CTTCTATCCC TCACCGATGG CGAATGCGAC GACGATTTAT CATACCGAAT TGAACTCGCT TAAAAACGTC AAACACACCA GTGAAGTGGT GCCAGTGCCG AAGAAGGGGC GTCAACGCCG CTTGCATAAA GCGTTGCTGC GTTACCATGA CCCAGCAGGT TGGCCTATTA TCCGTGAAGG CTTGATTGCC ATGGGGCGTG AAGATTTGAT CGGCAATAGT CCAAACCAAT TAGTGCCACC AGAAGGGCGC AATGAGCGCG GGCCTAAATG GATGAAGGAT GCCAACCAAG GCCAAAAAGC CTTTACACGT TTCTCGGGTA ATCAGTTCGA TGATCGTAAG GGGGCGACTA AATCTAAAGG GGCGATGAAA GGCGGTGTTA ATGCGGGTGC AGAGTCAAAA CCTGCCGGGA AAGGCGGAAA ACCTGCATTG AATGCGTCCA AGCCTAACGT ACCTAAGCCT AATGTGCCTA AGTCGAATCG TCCGGGAGCT AAAGCGCCTT TTGGACAATC GAGTGCTAAA GCATCAGGGG CTCAATCTAA GGGTGGCGGT AAACCGTCCC ATAATCGTCA GCAAGCTAAG TAA
|
Protein sequence | MQVESTLFSY PKYWAECYGT APFLPMSRKE MDKLGWDSCD IIIVTGDAYV DHPSFGMAVI GRMLEAQGYR VGIISQPDWS SKDAFMQLGR PNLFFGVTAG NMDSMINRYT ADRRIRTDDA YTPDDIGGKR PDRAVTVYTQ RCKEAFKDVP VIIGGIEASL RRIAHYDYWS DKVRRSVIFD AKADILMYGN AERPLAEVAR RLAAGESIND LHDVRGTAVI RKEPLPEWRG MDSRKIDQLH KIDPIPNPYG ADDVGCANLS GPSDAKIFDN DAPKAISVQP PRPKPWDKTY VLLPAFEKVS EDKYLYAHAS RILHQEQNPG CARALFQPHG DRGVWVNPPA WPLNTDEMDA VFDLPYKRVP HPAYGKAKIP AYDMIKTSIN IMRGCFGGCS FCSITEHEGR IIQSRSQESI IKEIKDIQDK VPGFTGVISD LGGPTANMYR LGCTSEKAEK TCRRLSCVFP SICGHLGTDH KHTIDLYRAA RAVPGIKKIL IASGVRYDLA IEDPAYVKEL VQHHVGGYLK IAPEHTEEGP LSKMMKPGMG AYDKFKELFD KYSKEAGKEQ FLIPYFISAH PGTTDEDMVN LALWLKERKF KLDQVQNFYP SPMANATTIY HTELNSLKNV KHTSEVVPVP KKGRQRRLHK ALLRYHDPAG WPIIREGLIA MGREDLIGNS PNQLVPPEGR NERGPKWMKD ANQGQKAFTR FSGNQFDDRK GATKSKGAMK GGVNAGAESK PAGKGGKPAL NASKPNVPKP NVPKSNRPGA KAPFGQSSAK ASGAQSKGGG KPSHNRQQAK
|
| |