| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_3659 |
|---|
| Symbol | |
|---|
| ID | 5078992 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella putrefaciens CN-32 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009438 |
|---|
| Strand | - |
|---|
| Start bp | 4265363 |
|---|
| End bp | 4266817 |
|---|
| Gene Length | 1455 bp |
|---|
| Protein Length | 484 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 640500865 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001185166 |
|---|
| Protein GI | 146294742 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG0397] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.269088 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAGTTTA AACAGGATTT TTTTACTCAA TTACCTGAGT TTTATTCTCA AGTATATCCG
CAGGGACTCA GTCATCCACA GTGGTTAGCA TGGAGTCATG ATGCTGCCCA ACTGATAGGC
TTAACTCAAC CTACGGACGA GTTACTGTTG GGGTTATCGG GTAATGCCGC CATCGATGGC
GCCACTTATT ATGCTCAAGT GTATAGCGGC CACCAATTTG GCGGGTATAC ACCGCGTTTA
GGCGATGGCC GCTCAATTAT TTTAGGTGAA GCGATAGGGC CGAATGGCGC ATGGGATGTG
GCACTTAAGG GCGGTGGCCC AACCCCATAC TCACGTCATG GTGATGGCCG CGCCGTGATG
CGCTCAGCCG TGAGGGAGTT CTTAGTCTCG GAAGCCTTAT ATCATTTACA TGTACCTACG
ACTCGCGCCT TAGCCGTAAT CGGTTCGGAT ATGCCTGTCT GGCGTGAGAG CCAAGAAACT
GCGGCGATTA CCGTGCGTTT AGCTCGTAGC CATATTCGTT TCGGCCATTT CGAATTTTTC
TGCCACAGTG AACGCGGCCG TGCCGATAAG CTGCTCCAAT TACTCAACTT CACTATTACT
CAGCATTATC CTCATTTGAG TTGCGATCCA TCGGGTTATA AAGCGTGGTT TTTACAGGTC
GTCCAAGATA CTGCTAAGAT GATTGCCCAT TGGCAGGCGG TGGGTTTTGC CCATGGGGTG
ATGAACACCG ACAATATGTC GATTTTAGGG GATAGTTTTG ATTTCGGCCC CTTTGCCTTT
CTTGATACTT TTCAAGAAGA TTTTATTTGT AACCATTCCG ATCCAGAAGG TCGTTATGCC
TTTGGTCAGC AACCTGGGGT CGGTTTATGG AATTTGCAGC GTTTAGCGCA GGCGCTCACG
CCTGTTATCC CATCCGATGA TTTAATTGCC ATTCTTAATC AATACCAAGA GGCGCTAGTA
CAGACCTATT TGCTGTTAAT GCGCGCCAAA TTGGGGCTGA CAACATTGGA TAAATCAACG
GCCGAGCAGG ATAAGCAAGA TCTTGAACTT ATAGGTCAAT TCACTGTGTT GATGGAAAAA
AACCAACTGG ATTACGCTCA AACATGGCGT CAATTTGGTC AGTTAGATCC AAGGAGTCAA
CATAGCTCTC TACGGGATGA TTTTATCGAT ACTCATCAGT TCGACACTTG GTATAAAGCT
TATCAGCTTA GATTAGGGGA CGTTACGGAT ATTGCGGCTT GGCAAACTGA GCGTAATAGT
GTCAATCCTA AATATATTTT GCGCAATTAT TTAGCTCAAG AGGCGATAAT TGCCGTAGAA
GAAGGTAACC TTGCGCCACT GCAGCGTTTG CAACAAGTGT TGAGTCAGCC ATTTGCAGAA
CAAGTTGAAC ATGATGAGTT AGCTAAGCGT CCACCCGATT GGGGCCAAGG GTTAATTATG
TCATGTAGTA GTTGA
|
|---|
| Protein sequence | MQFKQDFFTQ LPEFYSQVYP QGLSHPQWLA WSHDAAQLIG LTQPTDELLL GLSGNAAIDG
ATYYAQVYSG HQFGGYTPRL GDGRSIILGE AIGPNGAWDV ALKGGGPTPY SRHGDGRAVM
RSAVREFLVS EALYHLHVPT TRALAVIGSD MPVWRESQET AAITVRLARS HIRFGHFEFF
CHSERGRADK LLQLLNFTIT QHYPHLSCDP SGYKAWFLQV VQDTAKMIAH WQAVGFAHGV
MNTDNMSILG DSFDFGPFAF LDTFQEDFIC NHSDPEGRYA FGQQPGVGLW NLQRLAQALT
PVIPSDDLIA ILNQYQEALV QTYLLLMRAK LGLTTLDKST AEQDKQDLEL IGQFTVLMEK
NQLDYAQTWR QFGQLDPRSQ HSSLRDDFID THQFDTWYKA YQLRLGDVTD IAAWQTERNS
VNPKYILRNY LAQEAIIAVE EGNLAPLQRL QQVLSQPFAE QVEHDELAKR PPDWGQGLIM
SCSS
|
|---|
| |