Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_3649 |
Symbol | |
ID | 5078939 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | - |
Start bp | 4258248 |
End bp | 4259339 |
Gene Length | 1092 bp |
Protein Length | 363 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640500855 |
Product | branched-chain amino acid aminotransferase |
Protein accession | YP_001185156 |
Protein GI | 146294732 |
COG category | [E] Amino acid transport and metabolism [H] Coenzyme transport and metabolism |
COG ID | [COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase |
TIGRFAM ID | [TIGR01123] branched-chain amino acid aminotransferase, group II |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAATAA CTTACAATTT AAAACCTGCG TCCGAGCGCC GTACTGAGCA ATTCAAGCCC GAGGGGAATG TGGGCTTCGG TAGCCTCAGA ACCGATCATA TGTTTTTAAT GGATTACCGC GATGGTGAAT GGCATGATCC GCGAATTGTG CCCTATGGTC CATTTGAAAT GGCGCCGGGT GCAATGGCAT TACACTATGG TCAGTCAATC TTCGAAGGCG CGAAGGCCTT TATGCATGAA GATGGCGAGA TTTATACTTT CCGTATCAAT AAAAACGCCG AGCGGATGAA TCGCTCCGCC GATATCGTCT GTATTCCGAA TATCGATGAG CAGATGCAAA TCGATGCGAT CAATGCGTTG ATCGATGTGG ATCGTCTCTG GTTCCCGATG CAAGAAGGTG CCTGTTTGTA CATTCGCCCC TTTATTTTTG CGACCGAAGA TCGTTTGTCT GTTAGTCCGA GTTCTCGTTA TACCTTCTGT GTGGTATTAA GCCCTAGCGG TGCTTACTAT GCTGCTGGCG TGAATAAAGG TATTCGTTTG CTGATCAGCA AGACCTATCA CCGTGCGGTA TCGGGTGGAA CTGGCGCATC GAAGGCGGCG GGTAACTATG CTGCCTCTTT GCGAGCGGGT AAAGCGGCGG CGCAGTTTGG TGCATCACAA GTGTTATATC TTGACTCGAC CAATCAACAG ATTGAAGAAG CGGGCGCGAT GAACCATTTC CACATCTTAA AAGATGGCAC TGTGATTATT CCAACCTTCA CAGATACTAT TTTGAAGTCG ATCACCTCGC AATCCATTAT GGAATTAGGT GGGATGCTCG GTTGTGAAGT GCGCCAAGAA ACGGTAATGC TGGATAAATT TATCGCTGAT ATCGAATCCG GTGAAATTAT CGAGGCGGGG GGCTTTGGCA CTGCTGCCGT GGTTTCAGCC GTAGGTTCCT ATATTTTTGA AGATGGTCGT GTTGTCACTG TCGGTAATGG CGAAGTGGGT GAGCATATTC AGCGCATCTA CAAACTCTAT ACCGATATCC AAAAAGGCCA TATCAAAGGG CCTGAAGGTT GGGTAAAGCG TGTAGAGCGA ATCGCACCTT AA
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Protein sequence | MEITYNLKPA SERRTEQFKP EGNVGFGSLR TDHMFLMDYR DGEWHDPRIV PYGPFEMAPG AMALHYGQSI FEGAKAFMHE DGEIYTFRIN KNAERMNRSA DIVCIPNIDE QMQIDAINAL IDVDRLWFPM QEGACLYIRP FIFATEDRLS VSPSSRYTFC VVLSPSGAYY AAGVNKGIRL LISKTYHRAV SGGTGASKAA GNYAASLRAG KAAAQFGASQ VLYLDSTNQQ IEEAGAMNHF HILKDGTVII PTFTDTILKS ITSQSIMELG GMLGCEVRQE TVMLDKFIAD IESGEIIEAG GFGTAAVVSA VGSYIFEDGR VVTVGNGEVG EHIQRIYKLY TDIQKGHIKG PEGWVKRVER IAP
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