Gene Sputcn32_3649 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_3649 
Symbol 
ID5078939 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp4258248 
End bp4259339 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content48% 
IMG OID640500855 
Productbranched-chain amino acid aminotransferase 
Protein accessionYP_001185156 
Protein GI146294732 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase 
TIGRFAM ID[TIGR01123] branched-chain amino acid aminotransferase, group II 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAATAA CTTACAATTT AAAACCTGCG TCCGAGCGCC GTACTGAGCA ATTCAAGCCC 
GAGGGGAATG TGGGCTTCGG TAGCCTCAGA ACCGATCATA TGTTTTTAAT GGATTACCGC
GATGGTGAAT GGCATGATCC GCGAATTGTG CCCTATGGTC CATTTGAAAT GGCGCCGGGT
GCAATGGCAT TACACTATGG TCAGTCAATC TTCGAAGGCG CGAAGGCCTT TATGCATGAA
GATGGCGAGA TTTATACTTT CCGTATCAAT AAAAACGCCG AGCGGATGAA TCGCTCCGCC
GATATCGTCT GTATTCCGAA TATCGATGAG CAGATGCAAA TCGATGCGAT CAATGCGTTG
ATCGATGTGG ATCGTCTCTG GTTCCCGATG CAAGAAGGTG CCTGTTTGTA CATTCGCCCC
TTTATTTTTG CGACCGAAGA TCGTTTGTCT GTTAGTCCGA GTTCTCGTTA TACCTTCTGT
GTGGTATTAA GCCCTAGCGG TGCTTACTAT GCTGCTGGCG TGAATAAAGG TATTCGTTTG
CTGATCAGCA AGACCTATCA CCGTGCGGTA TCGGGTGGAA CTGGCGCATC GAAGGCGGCG
GGTAACTATG CTGCCTCTTT GCGAGCGGGT AAAGCGGCGG CGCAGTTTGG TGCATCACAA
GTGTTATATC TTGACTCGAC CAATCAACAG ATTGAAGAAG CGGGCGCGAT GAACCATTTC
CACATCTTAA AAGATGGCAC TGTGATTATT CCAACCTTCA CAGATACTAT TTTGAAGTCG
ATCACCTCGC AATCCATTAT GGAATTAGGT GGGATGCTCG GTTGTGAAGT GCGCCAAGAA
ACGGTAATGC TGGATAAATT TATCGCTGAT ATCGAATCCG GTGAAATTAT CGAGGCGGGG
GGCTTTGGCA CTGCTGCCGT GGTTTCAGCC GTAGGTTCCT ATATTTTTGA AGATGGTCGT
GTTGTCACTG TCGGTAATGG CGAAGTGGGT GAGCATATTC AGCGCATCTA CAAACTCTAT
ACCGATATCC AAAAAGGCCA TATCAAAGGG CCTGAAGGTT GGGTAAAGCG TGTAGAGCGA
ATCGCACCTT AA
 
Protein sequence
MEITYNLKPA SERRTEQFKP EGNVGFGSLR TDHMFLMDYR DGEWHDPRIV PYGPFEMAPG 
AMALHYGQSI FEGAKAFMHE DGEIYTFRIN KNAERMNRSA DIVCIPNIDE QMQIDAINAL
IDVDRLWFPM QEGACLYIRP FIFATEDRLS VSPSSRYTFC VVLSPSGAYY AAGVNKGIRL
LISKTYHRAV SGGTGASKAA GNYAASLRAG KAAAQFGASQ VLYLDSTNQQ IEEAGAMNHF
HILKDGTVII PTFTDTILKS ITSQSIMELG GMLGCEVRQE TVMLDKFIAD IESGEIIEAG
GFGTAAVVSA VGSYIFEDGR VVTVGNGEVG EHIQRIYKLY TDIQKGHIKG PEGWVKRVER
IAP