| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_3647 |
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| Symbol | |
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| ID | 5078937 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 4252210 |
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| End bp | 4253403 |
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| Gene Length | 1194 bp |
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| Protein Length | 397 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640500853 |
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| Product | putative AcnD-accessory protein PrpF |
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| Protein accession | YP_001185154 |
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| Protein GI | 146294730 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2828] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR02334] probable AcnD-accessory protein PrpF |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTAACA ATCTTTTTCC GCCCCAAATA AAAGTCGCCG CGACCTATAT GCGCGGCGGC
ACCAGTAAAG GGGTGTTTTT CCGTCTGCAG GATTTACCTC AGGCCGCACA AGTTGCTGGC
CCTGCCCGTG ATGCCTTGTT ACTGCGAGTG ATAGGCAGTC CCGACCCTTA CGGTAAGCAA
ATCGATGGTA TGGGCGGCGC CACCTCGAGC ACCAGCAAGA CGGTTATTCT GTCAAAAAGC
AGTCAAGCCG ACCACGATGT CGATTATCTC TTTGGCCAAG TGTCTATCGA CAAACCTTTT
GTCGATTGGA GCGGTAACTG TGGCAACTTA ACCGCCGCCG TCGGTGCCTT TGCCATCAGC
AATGGCTTAA TTGATACGGC CCGCATTCCA CACAATGGCA TCTGCACAGT GCGAATTTGG
CAAGCCAACA TAGGCAAAAC CATTATCGCC CATGTGCCAA TCACCAACGG TGAAGTGCAA
GAAACCGGTG ATTTTGAGCT CGATGGTGTG ACCTTTTCTG CCGCCGAAGT GCAAATCGAA
TTTATGAATC CAGCAGCTGA CGAGGATGGC GGCGGTGGCA GCATGTTCCC TACGGGCAAT
CTTGTCGATA TGTTAGAAGT GCCGGACATT GGCAGCTTTA ACGCTACTAT GATCAACGCG
GGCATTCCCA CCATTTTTAT CAACGCAGAA GACTTAGGCT ACACAGGCAC TGAGCTACAG
GATGATATTA ATAGCGACAA TGCCGCCCTT GCCAAATTTG AAACCATTCG CGCCTATGGC
GCCGTGCGTA TGGGCTTGAT TTCGCATATT GATGAAGCAG TTGCACGCCA ACACACGCCT
AAGATCGCCT TTGTCGCTAA ACCTAAAGCC TATGTGTCAT CGAGCGGTAA AACCGTCAAT
GCCGATGAAA TCGATCTACT GGTGCGCGCC TTGTCTATGG GCAAACTGCA CCACGCTATG
ATGGGCACGG CTGCCGTCGC GATTGGCACG GCTGCGGCAA TTCCCGGCAC TTTAGTCAAC
TTAGCCGCAG GCGGTGGCGA AAAGGAAGCG GTACGCTTTG GGCATCCTTC AGGCACGCTG
CGCGTGGGTG CGCAGGCCAT TCAAGAAAAT AGCGAATGGA CAGTGGTTAA AGCCATTATG
AGCCGTAGTG CTCGGGTGCT GATGGAAGGT TTTGTACGAG TACCCGCTGC GTAG
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| Protein sequence | MSNNLFPPQI KVAATYMRGG TSKGVFFRLQ DLPQAAQVAG PARDALLLRV IGSPDPYGKQ
IDGMGGATSS TSKTVILSKS SQADHDVDYL FGQVSIDKPF VDWSGNCGNL TAAVGAFAIS
NGLIDTARIP HNGICTVRIW QANIGKTIIA HVPITNGEVQ ETGDFELDGV TFSAAEVQIE
FMNPAADEDG GGGSMFPTGN LVDMLEVPDI GSFNATMINA GIPTIFINAE DLGYTGTELQ
DDINSDNAAL AKFETIRAYG AVRMGLISHI DEAVARQHTP KIAFVAKPKA YVSSSGKTVN
ADEIDLLVRA LSMGKLHHAM MGTAAVAIGT AAAIPGTLVN LAAGGGEKEA VRFGHPSGTL
RVGAQAIQEN SEWTVVKAIM SRSARVLMEG FVRVPAA
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