Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_3642 |
Symbol | |
ID | 5078932 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | - |
Start bp | 4245635 |
End bp | 4246141 |
Gene Length | 507 bp |
Protein Length | 168 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640500848 |
Product | hypothetical protein |
Protein accession | YP_001185149 |
Protein GI | 146294725 |
COG category | [S] Function unknown |
COG ID | [COG1683] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGCGGAA TGAGACATTT GGGGATGACA GTGGAAAAAG TGTTAGTGAG CAGTTGTTTA CTCGGACAAG CGGTGCGCTA CGACGGTGGC CATAACTTGA TGGAGAGCGA GCTGGTGCAA ACGTGGCTCG AGCAAGGGCG GATTGTGGCG ATTTGTCCCG AATGTGCAGG CGGTTTGCCA ACACCTAGAC CGCCAGCGGA GCGGATTGGA CAGCGCATCT TAACTGTTCA AGGTGAAGAT GTGACCCTCG CTTTTAGTCT TGGAGCTGAT ATTGCCCTTA AGCTGGCGCA GCAGGAAAGA ATTAAAGTAG CGATTCTAAA AGCCCGCAGT CCATCCTGTG GTAATAGGCT GATTTACGAT GGTCAATTTG TAAAACAGTT AATTGCGGGA CAAGGATTAA CGGCTGAAAA ACTCAGCGCC GCAGGGATAA CGGTATTCAA TGAATTTGAG TTATCTGATG CGGCGGCATT CGTTACAGAG CTAGAAGCTA GCAGCGTAAG ACGTTAG
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Protein sequence | MGGMRHLGMT VEKVLVSSCL LGQAVRYDGG HNLMESELVQ TWLEQGRIVA ICPECAGGLP TPRPPAERIG QRILTVQGED VTLAFSLGAD IALKLAQQER IKVAILKARS PSCGNRLIYD GQFVKQLIAG QGLTAEKLSA AGITVFNEFE LSDAAAFVTE LEASSVRR
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