| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_3634 |
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| Symbol | |
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| ID | 5078924 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 4234173 |
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| End bp | 4235837 |
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| Gene Length | 1665 bp |
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| Protein Length | 554 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640500840 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_001185141 |
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| Protein GI | 146294717 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1022] Long-chain acyl-CoA synthetases (AMP-forming) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00109176 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATACTG CGATTAAGAC ACCAATCGAA ATGCTGGCAC ACTGGGCTAA AGCTCGTGGG
GATGAAGTCT ATTTGCGCCA ACCAATCAAG GGACAATACC TTGATTTTAC GTGGGGTGAA
GTGCAAGAGA AAGTGCAGCA ATTAGCGGGG GCGCTACGTC ACTTAGGATT TGAGTCTGGC
GATAAAATTG CCGTCTTATC TAAAAACTGT GCAGAGTGGT TTATCACCGA TCTCGCCTTG
ATGCACGGCG GCTATATCAG CGTGCCAATT TACCCGACCG CCAACCCTGA TACCATACGT
TATGTGCTAC AACACAGTGG GGCTAAAGCC ATTTTTGTCG GTAAGCTCGA TCATTGGGCC
GATCAAGAAG CTGGGGTTGG TGGAGAATTA TTACGCCTAG CAATGCCCTA CGACACTATG
CCCGCCCAAT ATCAATGGGA ACAATTGCTA AATCTTGGTC ATCCTTTAAT TGAAGCTCCC
CTACCTAAGC TAGACCAAGT GATGACATTG ATCTACACCT CAGGTTCGAC AGGGCAGCCT
AAAGGTGCCA TTCAGACCTT TGCTAGCTAC GGCTGGACCT GTAAAGCCGT TGTACGTGAC
TTACGCACCG ATGGTGATGA TAGACTCTTA TCCTATCTGC CATTAGCCCA TATCACTGAA
CGCGTTGCGA TTGAAGGCTC ATCCTTTTAT TCGGGTAGCT CCGTTGCCTT TGTTGAAAGC
CTCGACTCCT TTGTCGCCGA TGTGCAACGG GCTAAACCGA CGGTGTTTTT CTCCGTTCCA
CGCCTGTGGA GCCTGTTCCA GAAAAATATC ATCGATAAAA TTGGCTTAAG CAAACTCAAC
CTGTTACTGA AAATTCCGCT ACTTAGCAGT TTTGTAAAAT ACAAAATTCA CAAGGGATTA
GGTTTAAACC ATTGTCGCCT GCTCGGCTCA GGATCTGCGC CTATTCCACC ATCATTGATC
CACTGGTATC ACAATATTGG CCTCAATATT TGTGAGGCTT GGGGAATGAC GGAAAACTGC
GCCTATTCGA TTATCAACTA TCCCTTTGAT GCCCGTAAAA TTGGTACTGT TGGACGTCCA
ATACAGGATT GCTTAATACG CCAAGGGGAC GATGGCGAGT TACTGATCAA AAGCCCCGGT
TTAATGACCG CCTATTATTT ACAACCCGAA GCGACTGCGG CAGCCTTCGA TGCCGATGGT
TTTTTCCATA CTGGCGATTT ATGTGCCATC GATGCCGATG GCTGCGTGAC TATTACTGGT
CGTGTTAAAG ACAATTTTAA AACCGCCAAA GGTAAATATG TCGCGCCAGT TCCTATTGAA
CGTAAATTAG CTCAGGATCC CTATGTAGAA CTGATTTGCG TTATTGGCTC TGGTTTGCCA
CATCCTGTCG CACTGGTACA ACTATCAGAA GGGGCAAGCC TACAAGCCCG TGAAGAAGTG
AGAGCCTCAC TGAAAGCAAC ACTCGACAGT GTTAACCCAC ACTTAGAGTC CCATGAACAT
GTCGATGCAA TTATCGTGGT CAGTGATCCT TGGACAATTG AGAATGATGT ACTCACCCCT
ACCCTCAAAA TCAAACGTCA TGTGCTTGAA AAAGCCTTTA GCGAACGAGT CGATGGCATT
AGAGGCGCTA AAATATGTTG GGAAGATGAG ATTTCTATTA AATAA
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| Protein sequence | MDTAIKTPIE MLAHWAKARG DEVYLRQPIK GQYLDFTWGE VQEKVQQLAG ALRHLGFESG
DKIAVLSKNC AEWFITDLAL MHGGYISVPI YPTANPDTIR YVLQHSGAKA IFVGKLDHWA
DQEAGVGGEL LRLAMPYDTM PAQYQWEQLL NLGHPLIEAP LPKLDQVMTL IYTSGSTGQP
KGAIQTFASY GWTCKAVVRD LRTDGDDRLL SYLPLAHITE RVAIEGSSFY SGSSVAFVES
LDSFVADVQR AKPTVFFSVP RLWSLFQKNI IDKIGLSKLN LLLKIPLLSS FVKYKIHKGL
GLNHCRLLGS GSAPIPPSLI HWYHNIGLNI CEAWGMTENC AYSIINYPFD ARKIGTVGRP
IQDCLIRQGD DGELLIKSPG LMTAYYLQPE ATAAAFDADG FFHTGDLCAI DADGCVTITG
RVKDNFKTAK GKYVAPVPIE RKLAQDPYVE LICVIGSGLP HPVALVQLSE GASLQAREEV
RASLKATLDS VNPHLESHEH VDAIIVVSDP WTIENDVLTP TLKIKRHVLE KAFSERVDGI
RGAKICWEDE ISIK
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