Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_3631 |
Symbol | rpoZ |
ID | 5078921 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | + |
Start bp | 4231095 |
End bp | 4231373 |
Gene Length | 279 bp |
Protein Length | 92 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640500837 |
Product | DNA-directed RNA polymerase subunit omega |
Protein accession | YP_001185138 |
Protein GI | 146294714 |
COG category | [K] Transcription |
COG ID | [COG1758] DNA-directed RNA polymerase, subunit K/omega |
TIGRFAM ID | [TIGR00690] DNA-directed RNA polymerase, omega subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.0529446 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTCGCG TAACTGTAGA AGACGCCGTA GAACAAATCG GCAACCGTTT TGATATGATC CTGGTTGCGG CGCGTCGTGC TCGCCAAATC GCCGTGCAGG GTAAAGACCC TATGGTTGAA GAGATGAACG ATAAGCCAAC GGTTATCGCC CTGCGTGAAA TCGAATTAGG CTTAGTTAAC GCTCACACCC TAGATGCTGA TGAGCGTCAA ACGGTGCGTG AACGTGAAGC TGCTGAAATT GCAGCGGTTG CAGCCATTGC TGAAGGCCGT TCATTATAA
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Protein sequence | MARVTVEDAV EQIGNRFDMI LVAARRARQI AVQGKDPMVE EMNDKPTVIA LREIELGLVN AHTLDADERQ TVREREAAEI AAVAAIAEGR SL
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