| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_3606 |
|---|
| Symbol | |
|---|
| ID | 5078896 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella putrefaciens CN-32 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009438 |
|---|
| Strand | + |
|---|
| Start bp | 4202505 |
|---|
| End bp | 4203314 |
|---|
| Gene Length | 810 bp |
|---|
| Protein Length | 269 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 640500812 |
|---|
| Product | phosphoesterase, PA-phosphatase related |
|---|
| Protein accession | YP_001185113 |
|---|
| Protein GI | 146294689 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTGTTTT ATAAAGAGGC TTTTATTTTG ACTCATCGCG CCAATCTTTT CTGCCGTTTA
GGCCTTGCTT GGTTATTGCT GGCAACGATT CCTAGCTTAT TATTACTGAC GCAAAACCAA
CTGTTTCCGC TGATCGATCT GCATTCTACA TTTGCCAGAA TGTTATATTG GATTACCACC
ACGGGCACCG CCCCCTATGG CGTGGCGACG GTCTTGTTTG TACTGGCGAT AGCCTATCGT
CTTATGCCTA AACCACTTTT TATCAGTCTA TTTTTAGCGA TTAGTATTAG CCAAGTCATA
AGCTTGAGCC TCAGCCATAC ACTCAAATCT TTTTTTAAAG AACCTCGGCC TAATGTGGTT
TTTCTCACTG AGCAAGCACT ACCTATAGAT GAACAGCTTT CACTTGATGC CTTCTATCAA
TTGGATAAAC AGACGCGATC TAAAACAATC GCTAATGTAC TCGATGGCTT AATCGCCACA
GACCCCACGA TGAAACTCGA CTCGCGTATC CATCAACATT GGGAAGATGA AGTCGGTTAC
TCTTTTCCCT CTGGACACAC TATCTTTGCT GCAACACTGG TACTTACCGC CAGTTACTAT
TTGCTGTGTG CTGGCTTACC CATGTTTGCA ATCCTGCTAT TAGGTTGGGG ATTATTAATG
GGATTAAGCC GGATGTTGCT CGGTATGCAC TGGCCGCAAG ATGTGCTCTT TTCTACCCTG
TTAGCGGCAG TGATCAGTTG GGTCAGTGTA CTATTGGTTG ATAAATTACG GCCTCTATCA
AGCTACGTAA TTAAAGATGC GCACAAATAG
|
|---|
| Protein sequence | MVFYKEAFIL THRANLFCRL GLAWLLLATI PSLLLLTQNQ LFPLIDLHST FARMLYWITT
TGTAPYGVAT VLFVLAIAYR LMPKPLFISL FLAISISQVI SLSLSHTLKS FFKEPRPNVV
FLTEQALPID EQLSLDAFYQ LDKQTRSKTI ANVLDGLIAT DPTMKLDSRI HQHWEDEVGY
SFPSGHTIFA ATLVLTASYY LLCAGLPMFA ILLLGWGLLM GLSRMLLGMH WPQDVLFSTL
LAAVISWVSV LLVDKLRPLS SYVIKDAHK
|
|---|
| |