| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_3599 |
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| Symbol | |
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| ID | 5078839 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 4194386 |
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| End bp | 4196398 |
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| Gene Length | 2013 bp |
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| Protein Length | 670 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640500805 |
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| Product | ATP-dependent DNA helicase Rep |
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| Protein accession | YP_001185106 |
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| Protein GI | 146294682 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0210] Superfamily I DNA and RNA helicases |
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| TIGRFAM ID | [TIGR01074] ATP-dependent DNA helicase Rep |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACTCA ATCCTGCCCA AAATGATGCT GTTCATTATG TTTCTGGCCC GTGCCTTGTG
TTGGCGGGTG CGGGCAGTGG TAAAACGCGC GTAATTATCA ATAAAATCGC TTATTTGGTC
GAAAAGTGTG GTTATAAGGC GCGCAATATT GCGGCGGTGA CCTTTACCAA TAAAGCCGCA
CGCGAGATGA AAGAGCGAAT TGCTCAGTCG ATGGGGCGTA AGGAAGCGAG AGGATTATGG
ATTTCGACGT TTCATACCCT TGGACTTGAG ATCATTAAGC GTGAGCATAA GGTATTGGGT
TTAAAGCCCG GATTTTCGTT GTTTGATGAT CAAGATACCT TGGCCTTACT CAAAGAGTTA
ACCCAAGACG AGTTAGATGA AGATAAAGAT TTACTTAAGT CGCTTGCGAG TACCATTTCA
AACTGGAAGG GCGGCTTAAT TATCCCGGAG CAGGCGCGCA AAATCGCTCA AGATGAGCAG
CAGCATTTAT TTGCCATGCT TTACCAGCGC TATGCTCAAC ATATGAAAGC TTATAATGCT
TTGGATTTCG ATGATTTAAT TCTATTGCCT ACCCTGTTAT TGAGGCACAA CGAAGAGGTT
CGGACTCGTT GGCAAACTAA GATCCAATAC TTGCTGGTGG ATGAATACCA AGATACCAAC
ACTAGCCAAT ATGAGATGGT GAAACTACTT GTAGGCGAGC GTGCTCGTTT TACTGTAGTG
GGGGATGATG ATCAATCTAT CTACTCATGG CGTGGCGCTA AACCACAAAA CCTTGTATTG
TTAGGTACTG ATTTTCCTAA ACTTAAGTTA ATTAAGTTAG AACAAAATTA CCGTTCTAGT
CAGCGGATTT TACGGGCTGC CAACATTCTG ATTGCGAATA ATCCCCACGT TTATGATAAA
GCGCTATTTA GCGAACTTGC CTATGGCGAG CCGCTACGAG TGTTATTTGC TGCTAATGAA
GAGCAGGAGG CTGAACGTGT CGTTGCAGAA ATAGTGCGAC ATAAGTTTGT TGGCCGTACT
CAGTTTGGCG ATTATGCGAT TTTGTATCGA GGCAATCATC AGTCACGCTT GCTTGAGCGA
GCACTGATGA CGAACCGTAT TCCTTATAAA TTGAGTGGTG GTACTTCATT TTTCGCTCGC
GCTGAAATTA AGGACATCAT GGGCTATCTA AAGCTAGTGG TGAATCCTGA CGACGATAAT
GCTTTCCTGC GTATTGTTAA CTTACCCAAA CGTGGCATAG GTCCGTCGAC ATTAGAGCGT
CTAGGTCATT TTGCGAATGA AAAGCATATA TCTATGTTTG CGGCGATTTT TGAGCCTGAA
CTCAATCACC ATCTTCCGCC AGCGGCTATG TCATCTTTGT ATCAGTTTGG GCGTTTTATC
GTGGAAACAG GCGATCAAGC ACAGCGCGGT GAGCCTGTAG AAGCTGTGAA GCAATTAATT
CGTAAAATCA ATTACGAAGA TTATCTATAC GAAACTAGCA CCAGTGCTAA GGCCGCTGAA
ATGCGGATGA AAAATATCTC AGAGTTGTAT CGTTGGGTCA CAGAGATGCT TGCTGGTGAT
GAGCTTGATG AACCTATGAC CTTACCCGAT GTGGTTAATC GACTAACGCT TAGGGATATG
ATGGAGCGTA ATAGTGAGGA TGAGGGGGGG GATCAGGTTC AGTTGATGAC TTTGCATGCT
TCAAAGGGCT TAGAGTTTCC CTATGTATTT ATGGTTGGCG TAGAGGAGCG GATCTTGCCC
CATCAAACCA GCATAGATGA AGACAATATC GATGAGGAGC GTCGTTTGGC GTATGTGGGT
ATCACCCGAG CTCAACGTGA GCTTTGGTTT ACGCTTTGCC GTGAAAGGCG CCAGTTTGGT
GAAACTATGC GTTGCGAGCC GAGTCGCTTC TTGTTGGAAT TACCACAAGA TGACCTTGTG
TGGGAAAATC GTAAACCACA GCAAACAGAG CAAGAGCGCA TACATACGGG GCGAAGCCAC
ATTGCTAATC TAAGGGATAT GTTTAAAAAG TGA
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| Protein sequence | MKLNPAQNDA VHYVSGPCLV LAGAGSGKTR VIINKIAYLV EKCGYKARNI AAVTFTNKAA
REMKERIAQS MGRKEARGLW ISTFHTLGLE IIKREHKVLG LKPGFSLFDD QDTLALLKEL
TQDELDEDKD LLKSLASTIS NWKGGLIIPE QARKIAQDEQ QHLFAMLYQR YAQHMKAYNA
LDFDDLILLP TLLLRHNEEV RTRWQTKIQY LLVDEYQDTN TSQYEMVKLL VGERARFTVV
GDDDQSIYSW RGAKPQNLVL LGTDFPKLKL IKLEQNYRSS QRILRAANIL IANNPHVYDK
ALFSELAYGE PLRVLFAANE EQEAERVVAE IVRHKFVGRT QFGDYAILYR GNHQSRLLER
ALMTNRIPYK LSGGTSFFAR AEIKDIMGYL KLVVNPDDDN AFLRIVNLPK RGIGPSTLER
LGHFANEKHI SMFAAIFEPE LNHHLPPAAM SSLYQFGRFI VETGDQAQRG EPVEAVKQLI
RKINYEDYLY ETSTSAKAAE MRMKNISELY RWVTEMLAGD ELDEPMTLPD VVNRLTLRDM
MERNSEDEGG DQVQLMTLHA SKGLEFPYVF MVGVEERILP HQTSIDEDNI DEERRLAYVG
ITRAQRELWF TLCRERRQFG ETMRCEPSRF LLELPQDDLV WENRKPQQTE QERIHTGRSH
IANLRDMFKK
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