| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_3587 |
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| Symbol | hemC |
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| ID | 5078823 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 4165190 |
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| End bp | 4166122 |
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| Gene Length | 933 bp |
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| Protein Length | 310 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640500789 |
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| Product | porphobilinogen deaminase |
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| Protein accession | YP_001185094 |
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| Protein GI | 146294670 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0181] Porphobilinogen deaminase |
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| TIGRFAM ID | [TIGR00212] porphobilinogen deaminase |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTGAAA ACCGCATACG TATCGCAACC CGCAAGAGTC CGCTAGCCAT GTGGCAAGCT
GAATTTGTTA AAGCCGAATT AGAACGCATT CACCCAGGTA TTGTGGTGGA ATTGCTACCA
ATGAGCACCA AGGGCGACGT GATATTAGAC ACGCCATTAG CAAAAGTAGG TGGTAAAGGT
CTGTTCGTCA AAGAACTTGA AGTGGCGATA CTAGAAGACC AAGCAGATAT TGCTGTGCAC
TCAATGAAAG ACGTGCCAGT AGATTTTCCT GAAGGACTCG GACTTGAGGT CATTTGCGAA
CGTGAAGATC CCCGTGATGC ATTTGTATCA AATATCTATA AAACGATCAG CGAATTACCA
CTTGGTGCAA CCGTTGGTAC TTCAAGCTTG CGCCGTCAAT GTCAACTGCG CGCATCACGC
CCCGATCTCA TTATTAAAGA TTTACGCGGC AACGTCGGCA CTCGCCTTGC TAAGCTGGAT
AACGGTGAAT ACGATGCCAT CATTCTTGCT GCTGCTGGTT TAATTCGCCT TAAATTATCA
GGACGCATTG CCAGCTTTAT TTCTGCCGAA CAGTCCTTAC CCGCTAACGG TCAAGGCGCT
GTGGGCATTG AATGCAGAAC CAACGATGAG CGAGTTAAAG CACTTCTAGC ACCATTAGAG
CATTTAGAAA CCCGCTACCG TGTTATCGCT GAGCGAGCCA TGAACACTCG CTTAGAAGGT
GGATGCCAAG TGCCTATTGG TGCATTTGCT GAAATTAATG GCGATGAGAT GACCTTACGC
GGTCTAGTCG GCAATCCTGA CGGCAGCGAA ATTATCGAAG GCATCATCAC AGGTCCGAAG
ACCGAAGCAA CACAATTAGG TGTGGCTCTT GCCGAAGAAC TCTTAAGCAA AGGCGCAAAA
AGTATCCTTG ACGCCGTTTA CGCTAAAGCC TAA
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| Protein sequence | MSENRIRIAT RKSPLAMWQA EFVKAELERI HPGIVVELLP MSTKGDVILD TPLAKVGGKG
LFVKELEVAI LEDQADIAVH SMKDVPVDFP EGLGLEVICE REDPRDAFVS NIYKTISELP
LGATVGTSSL RRQCQLRASR PDLIIKDLRG NVGTRLAKLD NGEYDAIILA AAGLIRLKLS
GRIASFISAE QSLPANGQGA VGIECRTNDE RVKALLAPLE HLETRYRVIA ERAMNTRLEG
GCQVPIGAFA EINGDEMTLR GLVGNPDGSE IIEGIITGPK TEATQLGVAL AEELLSKGAK
SILDAVYAKA
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