| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_3583 |
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| Symbol | |
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| ID | 5078819 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 4160619 |
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| End bp | 4161863 |
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| Gene Length | 1245 bp |
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| Protein Length | 414 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640500785 |
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| Product | diaminopimelate decarboxylase |
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| Protein accession | YP_001185090 |
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| Protein GI | 146294666 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0019] Diaminopimelate decarboxylase |
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| TIGRFAM ID | [TIGR01048] diaminopimelate decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGATCACT TTCTCTACCA TAATAATGCC CTGCACGCCG AAGGCTGTCA GGTTGCTGAT
TTAGCCAAAA CCTATGGCAC ACCACTATAT ATATATTCCC GTGCGACACT TGAGCGCCAT
TGGCATGCTT TTAATAATGC CGTTATGGAT CATCCACACC TCATTTGTTA TGCGGTCAAA
GCCAACGCTA ACTTGGCCGT ACTGAATGTG CTGGCACGTT TAGGCAGTGG TTTTGATATT
GTGTCTGGCG GTGAGTTGGC AAGGGTTATC GAAGCAGGAG GCTCCCCCGC TAAAGTGGTG
TTTTCTGGTG TGGGAAAAAC CGTTGCCGAG ATGGAGCAAG CGCTTAATCT GGGTATTTAC
TGTTTTAACG TCGAATCAAG CGCCGAGCTT GAGCAGTTAA ATCTGGTTGC GGGTCGTTTA
GGTAAAGTAG CACCCGTTTC ATTGCGGATT AATCCCGATG TGGATGCAGG AACCCATCCC
TATATTTCGA CCGGCCTTAA GGAAAACAAA TTTGGCATTG CTATGGATGA GGCTGAAATT
GTTTTCGCCC GTGCCCATGC GTTACCACAT CTAAAAGTGA AAGGTGTCGA TTGTCATATC
GGGTCACAAC TCACTGAGAT CCAACCATTT CTTGATGCAA TGGATCGTAT GCTGGCGCTC
ATAGATCGTC TGGCTGAGCA AGGAATTGTT ATCGAACATT TCGATGTAGG CGGTGGTTTA
GGAGTGACCT ATGATGATGA AACGCCACCA CATCCCGATG TATATGCGGC TGCGTTACTC
AAGCGTTTAG GCAACCGTAA ACTTAAACTG ATTTTCGAGC CTGGCCGTGC GATTGCAGCT
AATGCGGGGA TTTTTGTCAC TCAGGTGCTT TATCTGAAAG AAAACAGCGA CAAGCGTTTT
GCGATTGTCG ATGGCGCGAT GAATGACCTA ATTCGCCCCG CACTTTATAG TGCATGGCAA
AATATTATCC CAGTAGCGCC AAGAGACTCT GAGGCCTATG AATTTGATAT TGTAGGCCCT
GTGTGTGAAA CAGGCGATTT TCTAGGTAAA GAACGCAAGC TGGCTTTAGC TGCTGGCGAT
CTACTTGCGG TGCGTTCAAG TGGTGCCTAT GGTTTTGCTA TGGCATCCAA TTACAATACT
CGTCCCCGTG CGGCTGAAGT GATGGTCGAT GGCGAGCACG CTTTCTTAGT GCGTGAGCGA
GAAAAAATAT CTCAACTCTG GCAAGGTGAG CAACTCCTGC CGTAA
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| Protein sequence | MDHFLYHNNA LHAEGCQVAD LAKTYGTPLY IYSRATLERH WHAFNNAVMD HPHLICYAVK
ANANLAVLNV LARLGSGFDI VSGGELARVI EAGGSPAKVV FSGVGKTVAE MEQALNLGIY
CFNVESSAEL EQLNLVAGRL GKVAPVSLRI NPDVDAGTHP YISTGLKENK FGIAMDEAEI
VFARAHALPH LKVKGVDCHI GSQLTEIQPF LDAMDRMLAL IDRLAEQGIV IEHFDVGGGL
GVTYDDETPP HPDVYAAALL KRLGNRKLKL IFEPGRAIAA NAGIFVTQVL YLKENSDKRF
AIVDGAMNDL IRPALYSAWQ NIIPVAPRDS EAYEFDIVGP VCETGDFLGK ERKLALAAGD
LLAVRSSGAY GFAMASNYNT RPRAAEVMVD GEHAFLVRER EKISQLWQGE QLLP
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