| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_3580 |
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| Symbol | |
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| ID | 5078816 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 4158092 |
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| End bp | 4159000 |
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| Gene Length | 909 bp |
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| Protein Length | 302 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640500782 |
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| Product | tyrosine recombinase XerC |
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| Protein accession | YP_001185087 |
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| Protein GI | 146294663 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4973] Site-specific recombinase XerC |
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| TIGRFAM ID | [TIGR02224] tyrosine recombinase XerC |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.636062 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGCGATA TGTCGGACCT CGAAGTGACA TGCCTGCAGG ACTATGAGCG TTATTTACAT
TCAGAGCGGC AGTTGTCGGC TCACACTGTG CATAACTATC TCTATGAACT AAATCGTGTT
AGTACGCTAT TACCTAAAGA CGTTACCTTA CTTAATGTGG GTCGAGAGCA TTGGCAACAA
GTGCTCGCAA AATTACACCG CAAAGGCTTG AGCCCTCGCT CGCTTTCCTT GTGTTTATCT
GCGATCAAAC AGTGGGGTGA GTTTTTACTG CGGGAAGGGA TGATAGCGGT TAATCCAGCC
AAAGGACTCA GTGCACCTAA ACAAGCCAAG CCACTGCCTA AAAATATGGA TGTCGATTCC
CTTACTCATT TACTTGAAAT TGAAGGTACA GATCCCTTAA CGCTGCGAGA TAAAGCCATG
ATGGAATTGT TTTATTCCAG CGGATTACGT CTTGCCGAGT TAGCAGCACT CAATTTATCA
AGTGTACAGT ACGATCTGCG TGAAGTTAGA GTATTAGGTA AAGGCAATAA AGAGCGTATT
GTGCCAGTAG GCAGTTATGC CATTAAGGCA TTAGAGGCAT GGCTTGTATG TCGTCAGCAA
ATTCCTTGCG AAGATTGTGC ATTGTTTGTA ACGGGAAAAG GTAGACGATT ATCTCATCGG
AGTATCCAGT CGCGGATGGC AAAGTGGGGG CAGGAACAAG CGTTATCAGT GCGAGTCCAT
CCCCATAAAT TACGTCATTC TTTTGCGACT CATATGTTGG AGTCGAGTGC CGATCTGCGT
GCAGTGCAGG AATTATTAGG CCACGCAAAC CTCTCAACGA CACAAATTTA TACCAGTCTA
GATTTCCAAC ATCTTGCGAA GGTGTATGAT AGCGCCCATC CTAGAGCGAA AAAACAGCAG
GATAAATAA
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| Protein sequence | MGDMSDLEVT CLQDYERYLH SERQLSAHTV HNYLYELNRV STLLPKDVTL LNVGREHWQQ
VLAKLHRKGL SPRSLSLCLS AIKQWGEFLL REGMIAVNPA KGLSAPKQAK PLPKNMDVDS
LTHLLEIEGT DPLTLRDKAM MELFYSSGLR LAELAALNLS SVQYDLREVR VLGKGNKERI
VPVGSYAIKA LEAWLVCRQQ IPCEDCALFV TGKGRRLSHR SIQSRMAKWG QEQALSVRVH
PHKLRHSFAT HMLESSADLR AVQELLGHAN LSTTQIYTSL DFQHLAKVYD SAHPRAKKQQ
DK
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