| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_3579 |
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| Symbol | |
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| ID | 5078815 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 4157370 |
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| End bp | 4158092 |
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| Gene Length | 723 bp |
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| Protein Length | 240 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640500781 |
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| Product | HAD family hydrolase |
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| Protein accession | YP_001185086 |
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| Protein GI | 146294662 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTTGTT ATCTTAGACC TCAAAATATT CAAGCGATCA GTTTCGATCT CGATGATACT
CTGTACGACA ATCAACCTTA TATTTTAAAT GCCGAAGCCG AGTTAACTCA GTTTTTGCAT
CGGGCTTTTC CACTCACCAA GGCATGGCAA GCCTTCGACT GGCGAAGGTT GAAATTACAA
CTTCTGCAGC AAATTCCTGA GTTAGCACAT GATACGTCTG CAGCAAGAGT TGCCACCCTT
CGCCAAGGGT TATTACAACT GGGCTATTGT GAAAGCGAAG CCGAACGTGG CGCGAAAGAA
GGTTTAGATT GCTTTTATTT CCACCGTAGT CATTTTAAGG TTTCTGACGC TGTGCTCTCT
CTGCTCAAAC AGTTATCAGG ACATTTTAAA TTGGTAGGGA TCACCAATGG CAATGTGGAT
CCTGAACGTA TTGGGCTTGG AGATGCTTTT GAGTTTGTTT TGCGCCCAGG CCAAGGTGTG
CATATGAAGC CTGCGAAGGA TATGTTTTAC CTTGCCTGTA CTCGCTTAGA TATTGGACCG
CAACACCTTT TGCATGTGGG CGATAGTATG AATGCCGATG TGCGTGGTGC ACGCTTAGCG
GGGTGTCAGT CAGTTTGGCT TAACCCTAGT TTTGGACAAG TTGCATCTTT GCCAATTGCC
GCGCTTTTGC CCCACCTAGA GGTGGCTTCT TTAGATTCAT TAGTTGAAAT ACTCGTGCCA
TAG
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| Protein sequence | MRCYLRPQNI QAISFDLDDT LYDNQPYILN AEAELTQFLH RAFPLTKAWQ AFDWRRLKLQ
LLQQIPELAH DTSAARVATL RQGLLQLGYC ESEAERGAKE GLDCFYFHRS HFKVSDAVLS
LLKQLSGHFK LVGITNGNVD PERIGLGDAF EFVLRPGQGV HMKPAKDMFY LACTRLDIGP
QHLLHVGDSM NADVRGARLA GCQSVWLNPS FGQVASLPIA ALLPHLEVAS LDSLVEILVP
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