Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_3571 |
Symbol | |
ID | 5078807 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | + |
Start bp | 4150097 |
End bp | 4151638 |
Gene Length | 1542 bp |
Protein Length | 513 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640500774 |
Product | phosphoenolpyruvate carboxykinase |
Protein accession | YP_001185079 |
Protein GI | 146294655 |
COG category | [C] Energy production and conversion |
COG ID | [COG1866] Phosphoenolpyruvate carboxykinase (ATP) |
TIGRFAM ID | [TIGR00224] phosphoenolpyruvate carboxykinase (ATP) |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCGGATG GATTACACCG CGTTCATTAC AACCCCTCAA CAGCACAACT TGTCGAATTT GCCCTGCTAC GCGGCGAAGG TGAATTGACA GCCAATGGCG CATTAGTTGC AAAAACTGGC GCTCGCAGCG GTCGCTCACC CGGCGATCGT TTTATCGTCA AAGAGCCCAG TTCAGAGGCC GATATTGAAT GGGGCCCTGT CAACCAAGCT TTCGAACCCG GTGCTTTTGA AGGTTTATGG GCACGGGTTG AGGCATATCT TGCCGATAAA GAACTGTTTG TATCTGATCT CGAAGTCGGT GCCGATACAG AACATTACCA ACCCGTACGC GTTACTACGC AATACGCTTG GCACCAACTG TTCGCCCGCA ATCTATTTAT TATTCCTGAA GAATTTAATC GTAAAGACAA ACCAGTATGG CAAATTATCA ATGCCCCAGA CTTTGTTTGC GATCCCGCAC GTGATGGCAC TAACTCAGAT GCAGCCGTGA TTTTAAACTT CGCCGAACGT AAAGTGCTGC TCGCGGGCTT GAAATACGCT GGCGAAATGA AAAAATCTAT GTTCTCAGTG CAGAACTTCC TATTGCCAGC CCAAGGCGTG CTACCTATGC ACTGCTCAGC CAACGTAGGT AAAGATGGCG ACACTACGTT ATTTTTCGGT CTGTCTGGCA CGGGAAAAAC CACGCTATCT GCCGATCCCA AACGCTTCCT GATCGGTGAC GATGAACACG GCTGGGCACC GGGCGGCGTA TTTAATATCG AAGGTGGTTG CTACGCCAAA TGTATCGATT TAAGCCAGAA GAATGAGCCT GTGATTTGGG ATGCGATTCG TTTCGGCACT GTGCTTGAAA ACGTCGTCAT GGACGAACAC CGCGTCCCTA ACTACAAAGA CAGCAGCCTA ACGGAAAACA CTCGCGCGGC CTATCCGCTA GAACACATCG CCCAACGTAA AGAAGACAAG TGCGGCGCAG AGCCACATGC CGTTGTGTTC TTAACCTGCG ACGTATCTGG CGTATTGCCA CCAGTTTCTA TCCTGACTAA AGAACAAGCG GCATACCACT TCTTATCTGG CTATACCGCC AAAGTGGGTT CGACTGAAAT CGGCTCAACC TCAGCGATTC AATCGACCTT CTCAACGTGC TTCGGCGCAC CTTTCTTCCC ACGCCCTGCT GGCGTGTACG CTGAACTGTT AATGAAACGC ATTGAGTCAT TCGGTAGCCA AGTCTACTTA GTCAACACTG GCTGGACTGG CGGTCCACAT GGTGTGGGTA AACGTTTTGA CATCCCCACC ACTCGCGCCA TAGTCGATGC AATTGTCAGC GGTGAATTGA AAGATGTTGA AACCATCCAC TTAGACACCT TGAACCTCGC CGTTCCTGTT GCAGTGACAG GCGTAGACAG CAATTTACTC AACCCAATCA ACACTTGGGG CGATAAAGCG CTATATGCCG AATATGCCCA GAAGCTGGCC GAAGCTTTCA CTAAAAACTT CGCTAAGTAT CAAGTGTCAG ACGCAATCCG ACACGCAGGC CCAAAAGCAT AA
|
Protein sequence | MADGLHRVHY NPSTAQLVEF ALLRGEGELT ANGALVAKTG ARSGRSPGDR FIVKEPSSEA DIEWGPVNQA FEPGAFEGLW ARVEAYLADK ELFVSDLEVG ADTEHYQPVR VTTQYAWHQL FARNLFIIPE EFNRKDKPVW QIINAPDFVC DPARDGTNSD AAVILNFAER KVLLAGLKYA GEMKKSMFSV QNFLLPAQGV LPMHCSANVG KDGDTTLFFG LSGTGKTTLS ADPKRFLIGD DEHGWAPGGV FNIEGGCYAK CIDLSQKNEP VIWDAIRFGT VLENVVMDEH RVPNYKDSSL TENTRAAYPL EHIAQRKEDK CGAEPHAVVF LTCDVSGVLP PVSILTKEQA AYHFLSGYTA KVGSTEIGST SAIQSTFSTC FGAPFFPRPA GVYAELLMKR IESFGSQVYL VNTGWTGGPH GVGKRFDIPT TRAIVDAIVS GELKDVETIH LDTLNLAVPV AVTGVDSNLL NPINTWGDKA LYAEYAQKLA EAFTKNFAKY QVSDAIRHAG PKA
|
| |