| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_3566 |
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| Symbol | |
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| ID | 5078802 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 4143747 |
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| End bp | 4145312 |
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| Gene Length | 1566 bp |
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| Protein Length | 521 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640500769 |
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| Product | general secretion pathway protein E |
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| Protein accession | YP_001185074 |
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| Protein GI | 146294650 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
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| TIGRFAM ID | [TIGR02533] general secretory pathway protein E |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.294519 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGAAA TTCAATTATC CCAAGTCGAT GACTTAAGCC TAGCGTCTAA TGAACTAGGC
TTAGATACCG AAGGTGATGA GGTCTTTCGC TCCAATAGCA AAGAGCGCTT ACCCTTTGCC
TTTGCCCACC GTCACGAGGT GATTTTGGCC TATGGTGATA CAGACGAATT AAGTCTGTTC
CATACCGCTA AAACGCCACT TGCCGCCATG CTTGAAGCAC GGCGTTATTC GGGAGTTGAT
TTGCCCTTAG TGCAACTTGA GGCGGGTAGA TTTGAGGCCA AATTGACTCA GGTCTATCAG
GCTAATTCCT CTGAGGCGCA GCAACTGATG GAAGATATTG GCAACGAGAT GGATTTATTC
ACTCTTGCTG AAGAGTTACC TCAGACCGAA GATTTGCTTG AAGGTGATGA TGACGCGCCT
ATCATCAAAC TAATTAATGC TTTGTTATCC GAAGCGATTA AAGAAGAAGC CTCAGATATT
CATATCGAAA CCTATGAGAA GCAGTTAATC GTACGTTTTC GTGTTGATGG TGTGCTTAAA
GAAGTGCTTA AACCCAACCG TAAATTGTCG TCACTGTTAG TGTCGCGGAT TAAGGTGATG
GCGCGCCTCG ATATTGCTGA AAAGCGTGTA CCACAAGATG GCCGTATCTC ATTGCGTATT
GCGGGACGTG CCGTTGATGT ACGGGTGTCG ACCATGCCAT CGAGCCATGG TGAGCGTGTC
GTGCTGCGTT TACTTGATAA AAATGCGGGT AATCTTGATT TAAAACAACT GGGGATGACA
GACGGTATTC GCGTTAAATT TGAAGAACTT ATCCGTCGTC CACACGGTAT TATCTTAGTG
ACGGGTCCTA CTGGTTCAGG TAAAAGTACC ACGCTGTACG CAGGTTTAAC TGAGATTAAC
TCCAAAGACA CCAACATTCT CACTGTTGAA GATCCTATCG AATATGAGTT AGAAGGCATA
GGCCAGACCC AAGTTAACAC TAAGGCAGAT ATGACTTTTG CCCGTGGTCT AAGGGCGATT
TTACGTCAAG ATCCAGACGT GGTGATGATT GGTGAGATCC GCGACCTCGA AACCGCCCAA
ATTGCGGTAC AGGCGTCACT CACGGGTCAT ATGGTGATTT CAACCCTGCA TACTAACACC
GCCTCTGGCG CTATTACCCG TTTGCAAGAT ATGGGTGTCG AGCCTTTCCT CGTTTCATCG
AGTTTGCTTG GTGTGTTAGC TCAGCGTTTG ATCCGAACTC TGTGCCCTAA ATGTAAGATT
GAGCATGTTC CCGATGAACG TGAACGTGAA TTACTGGGCA TTGCCGCAGA TGATAACCGA
CACATCTTCC GTGCCAATGG CTGTAAGGCT TGTGGCGAAA GCGGTTATCG CGGTCGTACG
GGGATCCACG AACTACTGCT GGTGGATGAT AATGTGCGCG AGCTTATCCA TGGTGGTCGA
GGTGAGTTGG CGATTGAAAA ATACATTCGC CAGTTCGTAC CCAGTATTCG CCATGATGGC
ATGAGTAAGG TGCTCATGGG CATCACTACA CTTGAAGAAG TGCTAAGGGT GACCCGCGAG
GAGTAA
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| Protein sequence | MSEIQLSQVD DLSLASNELG LDTEGDEVFR SNSKERLPFA FAHRHEVILA YGDTDELSLF
HTAKTPLAAM LEARRYSGVD LPLVQLEAGR FEAKLTQVYQ ANSSEAQQLM EDIGNEMDLF
TLAEELPQTE DLLEGDDDAP IIKLINALLS EAIKEEASDI HIETYEKQLI VRFRVDGVLK
EVLKPNRKLS SLLVSRIKVM ARLDIAEKRV PQDGRISLRI AGRAVDVRVS TMPSSHGERV
VLRLLDKNAG NLDLKQLGMT DGIRVKFEEL IRRPHGIILV TGPTGSGKST TLYAGLTEIN
SKDTNILTVE DPIEYELEGI GQTQVNTKAD MTFARGLRAI LRQDPDVVMI GEIRDLETAQ
IAVQASLTGH MVISTLHTNT ASGAITRLQD MGVEPFLVSS SLLGVLAQRL IRTLCPKCKI
EHVPDERERE LLGIAADDNR HIFRANGCKA CGESGYRGRT GIHELLLVDD NVRELIHGGR
GELAIEKYIR QFVPSIRHDG MSKVLMGITT LEEVLRVTRE E
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