Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_3540 |
Symbol | |
ID | 5078733 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | - |
Start bp | 4113779 |
End bp | 4115041 |
Gene Length | 1263 bp |
Protein Length | 420 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 640500743 |
Product | phage integrase family protein |
Protein accession | YP_001185048 |
Protein GI | 146294624 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.216413 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCACAA AGCGAATTAA CAGCAATGCC ACATTGCAAG CATTAAATCC GCAAGATAAA GAGTACCTAA TCCCAGATAA AAAAATTGAG GGGTTAAATA TTCGTGTTCG TCCGACAGGC ACAATGACTT GGGTATTTCG ATTTCAAGTT GGTAAGAAGC ACGAAAAAAT CTCAATGGGT CGATACGATA AGATGAAACC TGAAACGGGG ATGACATTAG AGCAAGCAAG AAAAGAAGCG GGGCGTTTCC GTAGTTGGCT AGAAAATAAC AGAAATCCTA AGCAGGAGTT ATTAAGAGAG CAACGAGAGC AAGAAGAAGC GAAAACATTT GATGATGCTT TCGTGAGTTT TGATGAGAAG CAGCTATCAA AGCAATTGCG AGGTTCTCAG GCGAGAGCCA TCTATTTACG CGACATAAAG CCGTATCTTG GCAACATTAA ATTAGTTGAT TTGAGAATGA ATGATCTCAA TAAAGTGTTT GATGCTAAGG CGGATAAAAA TGGTCGGAGG ATGGCAGGCG CGATAGGGGT GTGTCACAAG ATCATCAATC AGGTTATCAA GCATGCCTTA GCGTTGAACA TGATCGATAA GCATCCTGCG CCGCTATTGA GGGCGAGAGA TGTTGGTGGT GGGACTAAAA TTACGAGACG AAATCTGAGC TTCTCCGAGC TGAAAATATT GCTAACAAGT TTGCCTTCTT GGCGAACGGA TGCTGCCAAT ATTCGGCTAT TACATTTTTT ACTTGGGTGC GGACAAAGGA TCAGTGCGGT ACTTGAAATG CACTGGAGTG AGGTTGATTT TGATGAAAAG CTCTGGTTGC TGCCTGCGAG CTCAGAAGAG CGGCACACTA AGAGCCAAGA AAGTCGTAAA GTGCCATTAA GTGATTACCT TATTAAGCTG CTGCTAGAGC AACGTGAGAG CGTTACTGAT AATTGGAAAT TGGTATGGCC TCAGGTTGGC TTAGATAAAA TACAAGAGCC CTCAGCAATT CGCTCACATA TCAAACGTAA CCTGCCGTCA AATCTCGAGC ATTTCTCGCC TCATGACTTG CGCCGCACTT TTATCAGTCG ATGCAGTGAA ATGGGACTAG ATATAGTGGC AATTGAAAAA ACAGTTGGTC ATCAGCTTCC TGGGATGCTG CGAGTCTATA ACCATCATGA TTACCTGAAT GAGCAATTAT CAGTATTGCA AGCTTGGGGT GAGAAGCTCG AAACACTAAT GATTGAAAAT GTGGTGCCTT TATCACCGCA GAAACTTGCT TAA
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Protein sequence | MTTKRINSNA TLQALNPQDK EYLIPDKKIE GLNIRVRPTG TMTWVFRFQV GKKHEKISMG RYDKMKPETG MTLEQARKEA GRFRSWLENN RNPKQELLRE QREQEEAKTF DDAFVSFDEK QLSKQLRGSQ ARAIYLRDIK PYLGNIKLVD LRMNDLNKVF DAKADKNGRR MAGAIGVCHK IINQVIKHAL ALNMIDKHPA PLLRARDVGG GTKITRRNLS FSELKILLTS LPSWRTDAAN IRLLHFLLGC GQRISAVLEM HWSEVDFDEK LWLLPASSEE RHTKSQESRK VPLSDYLIKL LLEQRESVTD NWKLVWPQVG LDKIQEPSAI RSHIKRNLPS NLEHFSPHDL RRTFISRCSE MGLDIVAIEK TVGHQLPGML RVYNHHDYLN EQLSVLQAWG EKLETLMIEN VVPLSPQKLA
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