Gene Sputcn32_3540 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_3540 
Symbol 
ID5078733 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp4113779 
End bp4115041 
Gene Length1263 bp 
Protein Length420 aa 
Translation table11 
GC content43% 
IMG OID640500743 
Productphage integrase family protein 
Protein accessionYP_001185048 
Protein GI146294624 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.216413 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCACAA AGCGAATTAA CAGCAATGCC ACATTGCAAG CATTAAATCC GCAAGATAAA 
GAGTACCTAA TCCCAGATAA AAAAATTGAG GGGTTAAATA TTCGTGTTCG TCCGACAGGC
ACAATGACTT GGGTATTTCG ATTTCAAGTT GGTAAGAAGC ACGAAAAAAT CTCAATGGGT
CGATACGATA AGATGAAACC TGAAACGGGG ATGACATTAG AGCAAGCAAG AAAAGAAGCG
GGGCGTTTCC GTAGTTGGCT AGAAAATAAC AGAAATCCTA AGCAGGAGTT ATTAAGAGAG
CAACGAGAGC AAGAAGAAGC GAAAACATTT GATGATGCTT TCGTGAGTTT TGATGAGAAG
CAGCTATCAA AGCAATTGCG AGGTTCTCAG GCGAGAGCCA TCTATTTACG CGACATAAAG
CCGTATCTTG GCAACATTAA ATTAGTTGAT TTGAGAATGA ATGATCTCAA TAAAGTGTTT
GATGCTAAGG CGGATAAAAA TGGTCGGAGG ATGGCAGGCG CGATAGGGGT GTGTCACAAG
ATCATCAATC AGGTTATCAA GCATGCCTTA GCGTTGAACA TGATCGATAA GCATCCTGCG
CCGCTATTGA GGGCGAGAGA TGTTGGTGGT GGGACTAAAA TTACGAGACG AAATCTGAGC
TTCTCCGAGC TGAAAATATT GCTAACAAGT TTGCCTTCTT GGCGAACGGA TGCTGCCAAT
ATTCGGCTAT TACATTTTTT ACTTGGGTGC GGACAAAGGA TCAGTGCGGT ACTTGAAATG
CACTGGAGTG AGGTTGATTT TGATGAAAAG CTCTGGTTGC TGCCTGCGAG CTCAGAAGAG
CGGCACACTA AGAGCCAAGA AAGTCGTAAA GTGCCATTAA GTGATTACCT TATTAAGCTG
CTGCTAGAGC AACGTGAGAG CGTTACTGAT AATTGGAAAT TGGTATGGCC TCAGGTTGGC
TTAGATAAAA TACAAGAGCC CTCAGCAATT CGCTCACATA TCAAACGTAA CCTGCCGTCA
AATCTCGAGC ATTTCTCGCC TCATGACTTG CGCCGCACTT TTATCAGTCG ATGCAGTGAA
ATGGGACTAG ATATAGTGGC AATTGAAAAA ACAGTTGGTC ATCAGCTTCC TGGGATGCTG
CGAGTCTATA ACCATCATGA TTACCTGAAT GAGCAATTAT CAGTATTGCA AGCTTGGGGT
GAGAAGCTCG AAACACTAAT GATTGAAAAT GTGGTGCCTT TATCACCGCA GAAACTTGCT
TAA
 
Protein sequence
MTTKRINSNA TLQALNPQDK EYLIPDKKIE GLNIRVRPTG TMTWVFRFQV GKKHEKISMG 
RYDKMKPETG MTLEQARKEA GRFRSWLENN RNPKQELLRE QREQEEAKTF DDAFVSFDEK
QLSKQLRGSQ ARAIYLRDIK PYLGNIKLVD LRMNDLNKVF DAKADKNGRR MAGAIGVCHK
IINQVIKHAL ALNMIDKHPA PLLRARDVGG GTKITRRNLS FSELKILLTS LPSWRTDAAN
IRLLHFLLGC GQRISAVLEM HWSEVDFDEK LWLLPASSEE RHTKSQESRK VPLSDYLIKL
LLEQRESVTD NWKLVWPQVG LDKIQEPSAI RSHIKRNLPS NLEHFSPHDL RRTFISRCSE
MGLDIVAIEK TVGHQLPGML RVYNHHDYLN EQLSVLQAWG EKLETLMIEN VVPLSPQKLA