| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_3523 |
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| Symbol | |
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| ID | 5078716 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 4094178 |
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| End bp | 4097291 |
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| Gene Length | 3114 bp |
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| Protein Length | 1037 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640500726 |
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| Product | hypothetical protein |
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| Protein accession | YP_001185031 |
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| Protein GI | 146294607 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0610] Type I site-specific restriction-modification system, R (restriction) subunit and related helicases |
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| TIGRFAM ID | [TIGR00348] type I site-specific deoxyribonuclease, HsdR family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTTCAATG AAGATTCTCG CGTTAAAATC CCTACCATAC TTCACCTGAT GCGCCTGGGT
TATCAGTACT TATCGCTCAA AGATCACTCT TGGGACCTGG ATACCAACAT CTTTCCCGAG
TTATTTAAAA AAGCAATTTC CAAGATAAAT CAGGGCATCG AAGAAGACGA AGCAAGACGT
TTGCTCAACG ATGTTAAGTT GCTACTGGAT AACGAAGATT TAGGTCGCGC CTTTTTTGAA
CGCCTTTCAG AGCGTTCAAA TATCAAGCTT ATCGATTTTG AGAACTTCAA TAACAACAGT
TTCCATGTGG TCACAGAACT GACTTGTAAG AACGGTGATG AAGAGTTTCG CCCAGATATT
ACCTTGTTGA TTAACGGTAT GCCGTTGGCA TTTATTGAGG TGAAAAAGCC GAATAACCGA
GAGGGGATTT TGGCTGAACG AGACCGTATC AATAAACGCT TTCAGAACCC TAAGTTTAAG
CGCTTTGCCA ATATCACCCA GTTTATGATT TTCTCTAATA ACATGGGGTA CGATGAGGGC
GACCCAGAAC CCATACAAGG AGTCTTTTAC GCTAGCAGTT CATATCACAA GCCAGTATTC
AATTACTTCC GTGAAGAAGA GGTGTTAAAT CTCACTGCAT TATTGAAGCC CGTATCGGAT
GAAGATGAGC TAAGAGTATT AAAAGACAAT AACCTAGAAG TGATCCGCAG TAATCCTGAA
TTTCATACGA ACAAGCAACC CGAGCGCCCA ACCAATCGTA TCTGTAGTTC ATTGGTCAGT
CGTGACCGCT TAGCCTTTAT TCTTCGCTAT GCACTGACAT ATGTGTCTGA GTCCGAAGGT
TTACAAAAGC ACATAATGCG TTACCCGCAG TTGTTCGCAA CCAAAGCGAT TGAAGATAAG
CTCAACACTG GCATTAAAAA AGGCATCATT TGGCATACCC AGGGCAGTGG GAAAACTGCA
CTCACATTTT ACAACGTGCG ATTTTTAACT GACTACTTCC AACGCCAACA GGTGATCCCT
AAGTTTTACT TTATCGTCGA TAGGTTAGAC TTGTTACAAC AAGCACTACG TGAATTTACA
GCTCGCGGTC TTACAGTATA TACAGTGAAT TCACGGGAAG AATTTGCACG CGATATCAAA
GCGACGCAAG TCATCCACAA TCACTCTGGT AAGCCAGAAA TCACAGTAGT GAATATCCAA
AAATTTGAAG ATGATCCTGA CGTAGTTAGC ACCAAAGACT ACAACGTTGC GATACAGCGA
GTGTACTTTT TGGACGAAGT GCACCGCAGC TACAACCCCA AAGGTAGCTT TTTAGCCAAT
TTAAGTCAGT CAGACACCAA CGCCATCAAA ATAGGCTTAA CCGGTACACC GCTATTGGGT
GATGACTACA ACTCACGCGC ATTGTTCGGC GACTACATTC ACAAGTATTA CTACAACGCT
TCAATTGCCG ACGGTTACAC TCTGCGTTTG ATCCGCGAAG AAATCTCCAC CCAATATAAA
ATTGAGCTAC AAAAAGCGTT AGAAGAAGCT GAAGTGAAGA TGGGGGATGT CGATCGCAAA
TTGATCTATG CCCATCCAAG TTTTGTTGAG CCTATGCTCG ATTATATTGT CACTGACTTT
GAAAAAAGCC GTGGTGCATT AAACGATGCT AGTATTGGCG GTATGGTGAT CTGTGATAGT
TCAGAGCAAG CGGAACAGAT GTTTGAGATT TTCAATGCTG TGTATGCTGA AACACCTCTT
CTACCTCAAA AGCATATCAA CTCAACGTGT GAAGTATTAG AAGTCGCTGA GCCTACACCA
GTCGCTTACG CCGAATCCAT TAAACAAGCA CAAAAGGTAA AAAGTGCAGC GCTGATTCTG
CACGACATAG GAACTAAAGA AGAGCGTAAA AACTGGGTAG AAGACTTTAA AGCAGGCAAA
ATCGATTTAT TGTTCGTTTA TAACATGCTG CTCACTGGCT TTGATGCCAA GCGATTAAAA
AAGCTCTACT TAGGCAGAGT GATTCGTAAA CACAACTTGC TGCAAGCCTT GACGCGAGTA
AATCGCCCTT ACAAAAACTT CCGCTATGGC TACATCGTAG ATTTTGCCGA TATACGCAAA
GAATTTGATG CTACCAATAA AGCCTATTTC GACGAGTTAC AGTCTGAATT AGGTAATGAG
ATGGAACACT ACTCGCACCT GTTTAAATCT CAGGAAGAGA TCAAGCAAGA AATCGAGCAC
ATCAAAGACG TGTTGTTCCG TTTTGATACC GAAAACATGG AAGAGTTTTG CAACCAGATC
AGCCAAATTC AGGACCGCGA TACCGTCTTA GCATTAAAAA AAGCCCTAGC CGATGCTCGT
AGTCTGTATA ATCTCATCCG CTTACAGGGC GATTATGAGA GTCTGGCTGA CTTAGATTTT
GCCAAACTTA ATGTGCTCTA CCGCGAAACC TGCAACCATC TTGATTTACT TAACCTCAAG
AACGATTTAG AAAGCGGTCA AGACACCAGT AACTTACTCA ACCGTGCCTT GGAAGATGTG
ATATTCAAGT TTGTCAAAAT CGGCGAGGAA GAGTTAGTTC TGGCCGATAA GCTGAAAAGC
ACTCTGCGGC AAACTCGAGA AGCGCTGGCC AGCAATTTTG ACCAGCAAGA CCCGCAGTTC
ATCAGCTTAA AAGAAGAGTT AGAGCGCCTG TTTAAGAAGA AAAACTTAAG TGAAGTTACC
CAAGACGAAA TGGTTGCCAA CATCGACGCG CTCAATAAAA TTTACGATCG TGTTAAAGAG
CTAAACCGCC AAAACAACCA ACTGCGGCAA AAGTACTTGG GCGATGCAAA ATACGCTCGC
ATCCATAAGC GGTTGCAAGA ACGTCAAAGC AAGCAGGGTG ACATTAGCGA ATCAGAGCGT
AAAATCTTTG CCGCTCTAGC CGGCGTAAAA ATAGATGCAG ACGAGCAGGT ACTGAATAAC
AGTCAGATTT TGGATAACGA AGGCTATTTT GAACGTCAAA TGATGCCTCT GGTGATTACT
CGCTTTATGA AAGAGCAGCA GATCAAGCTC AATGCCGACG CCTCCCGCTA CATTAATCAC
TTGGTCGTCG CTGAATATTT AAAAGAATTT AATACTGGTA GCCAATCTTG GTAG
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| Protein sequence | MFNEDSRVKI PTILHLMRLG YQYLSLKDHS WDLDTNIFPE LFKKAISKIN QGIEEDEARR
LLNDVKLLLD NEDLGRAFFE RLSERSNIKL IDFENFNNNS FHVVTELTCK NGDEEFRPDI
TLLINGMPLA FIEVKKPNNR EGILAERDRI NKRFQNPKFK RFANITQFMI FSNNMGYDEG
DPEPIQGVFY ASSSYHKPVF NYFREEEVLN LTALLKPVSD EDELRVLKDN NLEVIRSNPE
FHTNKQPERP TNRICSSLVS RDRLAFILRY ALTYVSESEG LQKHIMRYPQ LFATKAIEDK
LNTGIKKGII WHTQGSGKTA LTFYNVRFLT DYFQRQQVIP KFYFIVDRLD LLQQALREFT
ARGLTVYTVN SREEFARDIK ATQVIHNHSG KPEITVVNIQ KFEDDPDVVS TKDYNVAIQR
VYFLDEVHRS YNPKGSFLAN LSQSDTNAIK IGLTGTPLLG DDYNSRALFG DYIHKYYYNA
SIADGYTLRL IREEISTQYK IELQKALEEA EVKMGDVDRK LIYAHPSFVE PMLDYIVTDF
EKSRGALNDA SIGGMVICDS SEQAEQMFEI FNAVYAETPL LPQKHINSTC EVLEVAEPTP
VAYAESIKQA QKVKSAALIL HDIGTKEERK NWVEDFKAGK IDLLFVYNML LTGFDAKRLK
KLYLGRVIRK HNLLQALTRV NRPYKNFRYG YIVDFADIRK EFDATNKAYF DELQSELGNE
MEHYSHLFKS QEEIKQEIEH IKDVLFRFDT ENMEEFCNQI SQIQDRDTVL ALKKALADAR
SLYNLIRLQG DYESLADLDF AKLNVLYRET CNHLDLLNLK NDLESGQDTS NLLNRALEDV
IFKFVKIGEE ELVLADKLKS TLRQTREALA SNFDQQDPQF ISLKEELERL FKKKNLSEVT
QDEMVANIDA LNKIYDRVKE LNRQNNQLRQ KYLGDAKYAR IHKRLQERQS KQGDISESER
KIFAALAGVK IDADEQVLNN SQILDNEGYF ERQMMPLVIT RFMKEQQIKL NADASRYINH
LVVAEYLKEF NTGSQSW
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