Gene Sputcn32_3510 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_3510 
Symbol 
ID5078703 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp4082595 
End bp4083695 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content43% 
IMG OID640500713 
ProducttRNA (uracil-5-)-methyltransferase 
Protein accessionYP_001185018 
Protein GI146294594 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2265] SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase 
TIGRFAM ID[TIGR02143] tRNA (uracil-5-)-methyltransferase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.1665 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACTTAG CAGCAATGGA CCCTCAGACT TATGATGCGC AGTTAGAACA CAAGCGTATC 
AAGCTAGAAC AAGCCTTTGC CCAATTTGAA ACACCGAGTG TTGAAGTTTT TGCCTCAGAG
CCAGCTAACT ACCGTATGCG CGCGGAATTC CGCATGTGGC ATGATGGTGA CGACTTATAC
TATTACATGT TCGATAAAGT ATTGAATGAG AAAGTACGTT GCGATCAATA CTTACCAGCT
AGCGTGCTCA TCAATCAAAT GATGTCGGCC TTAATCGCCG AGCTGAAACC GAATCCGAGT
CTAAGGCACA AACTGTTCCA AGTGGATTTT TTGTCGACTT TAAGCGGCGA GATCTTAGTG
TCTTTGCTTT ATCACAGGCA GCTTGATGAC CAATGGCGCA CCAATGCGGC TGCACTGAAA
GCCAAGTTAA GTAGCCAGTT TAACGTCAAC ATCATCGGCC GTGCCCGTAA GCAAAAAATC
GATTTAGATA AAGACTTTGT GGTTGAGTCA TTACAAGTCA ATGATAAAAC CTTCTTATAT
AAGCAGATAG AGAATAGCTT TACCCAACCG AACGCTAAAG TAGCAGTCAA AATGTTGGAG
TGGGCAATCG ATGTCACTCA AGATAGCCAA GGCGATTTGC TTGAGCTTTA CTGTGGCAAT
GGTAACTTTT CAATTGCATT GGCCCAAAAC TTTAATCGCG TACTTGCGAC TGAACTTGCG
AAACCCTCGG TAGAGGCCGC GCAATACAAT ATTGAGGCTA ATGGCATTAA AAATCTGCAG
ATTATCCGTA TGTCGGCTGA AGACTTTAGT GATGCTATGG CAAAAAAACG CAGTTTTAGG
CGTTTAGAAG GGATCGATCT TGATAGCTAT GTTTGTAATA CTATTTTTGT CGACCCACCA
CGCGCTGGAA TCGATCCTGA TACTTTGGCT TTAGTGCAAG GTTACGAGCG GATTTTATAT
ATTTCCTGTA ATCCTGACAC CTTAAAAGAC AATCTGGAAC AACTGTACAA AACCCATAGA
GTCACACAAT TTGCCCTATT TGATCAGTTC CCCTACACCG ATCACATGGA AACAGGTGTA
CTGCTAGAGC GTACTCAATA A
 
Protein sequence
MNLAAMDPQT YDAQLEHKRI KLEQAFAQFE TPSVEVFASE PANYRMRAEF RMWHDGDDLY 
YYMFDKVLNE KVRCDQYLPA SVLINQMMSA LIAELKPNPS LRHKLFQVDF LSTLSGEILV
SLLYHRQLDD QWRTNAAALK AKLSSQFNVN IIGRARKQKI DLDKDFVVES LQVNDKTFLY
KQIENSFTQP NAKVAVKMLE WAIDVTQDSQ GDLLELYCGN GNFSIALAQN FNRVLATELA
KPSVEAAQYN IEANGIKNLQ IIRMSAEDFS DAMAKKRSFR RLEGIDLDSY VCNTIFVDPP
RAGIDPDTLA LVQGYERILY ISCNPDTLKD NLEQLYKTHR VTQFALFDQF PYTDHMETGV
LLERTQ