Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_3500 |
Symbol | |
ID | 5080535 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | + |
Start bp | 4065569 |
End bp | 4066510 |
Gene Length | 942 bp |
Protein Length | 313 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640500698 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001185008 |
Protein GI | 146294584 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0910886 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTAAAAC GTTTGGATCT GAATTTACTG CCCGTACTCG AAATCCTACT TGAGGAACAA AGCGTGACCG CCGCTGCGGC GCGGTTGCAT TTGAGCCAGT CGGCGGTGAG TAAACAGCTC ACACGTTTGA GAGAAGTGTT TGACGATCCT TTATTTGAGC GTACCGCCTA TGGCCTAAAA CCGACGCCCA AGGCCTTGTC ACTCGCGCCT GAGTTGCGCC AATGCTTACA GCAGCTGGCG CAATTTACTC GCCCCAACAC CTTTGAACCG GTCTTGAGCC AACGTCAATT TAGAATGCAT TTGGTTGAAA CCACCTATTC GCTGACCTTT CCCCATTTTA TGCCCACGTT GCTTACCCAA GCGCCCGGTG TGAGTCTCAA TTGTCAAACA TGGCGACTCG ATACTATGGA CAAATTACTG CGCTGCGACA TCGACTTAGC CATAGGTTGT CGCGAGTGGG ACGAGCGCTC GCCCATGCAT GTGAATAATA TTCCCGATGA CTTATGTCAT GCTGAGTTAG TGCAGGATTA TCCAGTGTGT TTGATGCGCC GTGATCATCC GGCGTTAACG CAAGAGTGGA ATTTAGATAC CTTCTTGAGT TATCGTCATC TGCAAGTGGC TTTTGGTGGT TTAGAGCATT GGTTGCTGGA TGATGTGTTG CAACTCGAGG GCCGTAAACG GGATATTGCC GTGAATATGA CCGACTTTCA GAGTGCTCTC ACCCTGTGTG AACAGAGCGA TTTGATCCTC TGTGCACCTT CGCGGTATGC CTTGGCTGTG ATGAAGTCTT TTGAGCTTCA GTCTTTACCA TCACCCATCA AGCTGATCCC CGGTGCGTAT TTATTGATGT GGCACAAACA CTTCGAACAC GACTTAAGCC ATAAATGGCT GCGAGAGTTG ATTATCAATC GAGTGCATCA ATCACACTCG CCTCAAACTT AG
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Protein sequence | MLKRLDLNLL PVLEILLEEQ SVTAAAARLH LSQSAVSKQL TRLREVFDDP LFERTAYGLK PTPKALSLAP ELRQCLQQLA QFTRPNTFEP VLSQRQFRMH LVETTYSLTF PHFMPTLLTQ APGVSLNCQT WRLDTMDKLL RCDIDLAIGC REWDERSPMH VNNIPDDLCH AELVQDYPVC LMRRDHPALT QEWNLDTFLS YRHLQVAFGG LEHWLLDDVL QLEGRKRDIA VNMTDFQSAL TLCEQSDLIL CAPSRYALAV MKSFELQSLP SPIKLIPGAY LLMWHKHFEH DLSHKWLREL IINRVHQSHS PQT
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