| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_3492 |
|---|
| Symbol | |
|---|
| ID | 5080527 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella putrefaciens CN-32 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009438 |
|---|
| Strand | + |
|---|
| Start bp | 4057108 |
|---|
| End bp | 4058541 |
|---|
| Gene Length | 1434 bp |
|---|
| Protein Length | 477 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 640500690 |
|---|
| Product | peptidase M16 domain-containing protein |
|---|
| Protein accession | YP_001185000 |
|---|
| Protein GI | 146294576 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0612] Predicted Zn-dependent peptidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAATCAT TTGGAAAACC CTCTACGTTA ATGGCGGCTT TAGCTTTAGG AACAAGTTTG
GCCTTAGCAG GCTGTGCGGC GATATCAGCC CCAAAACTCG TTGATACTGG CAGCTTTGCC
ATGCCAAGTT ACGATAAGTT TGTGTTAGAT AATGGCCTTA CTGTGTATTT AATGCCCCAG
CGCGAAGTGC CCTTAATTAC CTTAAATGCC GTGGTGCGCG CAGGTGCCGT CAATGACACC
ACTGCAGGCG TGGCACAAAT GACGGCAGAA GGTTTATTGT TAGGTGCAGC GGGTAAATCT
AAGGCCGATA TCGAGCAGCA AGTGGATTTT CTTGGTGCCA GTTTAGGCGC TGATGCAGAT
AAAGAAGGCA GTTATCTGAG TGCTGACTTT ATGGCGAAGG ATATTGACCT CATGCTGGGC
CTATTTAGCG CCGCCATATT AACCCCTGAT TTTGATGCGG CCGAATTTGA TAAACTCAAA
CAACGCGCCA TTGCCGGGCT GCAGCAAGAT AAAGAAAGCC CACGGGCGGT GATTGGTCGC
TACTTCGATA AACTCGTATT TGGCGATCAT CCCTATGGTA ATGCGGCTTC AGGTAACAGT
GATTCGCTAG AGCAAATCAC TGTATCGCAG CTACGCGCTT TCCATAAGAG TTACTATCAG
CCTGCCAATA CCGCGATAAC CGTTGTGGGT GACTTTGATG TGACTGCTAT GAAAGCCAAA
CTGACACAAA CATTCGGCCA ATGGAAAGAC AGCGAAAAAC TGGTACAGCC TAATTTAAAC
CAAGGTTTGC CTCAGTTAAC CGAGGCCAAA GTTTTGTTGG TGGATAAACC CGATGCAATC
GAAACCACCT TTTTGATCGG CGGTTTAGGC ATTAGCCGTA ATAACCCTGA CTATGTGGGT
TTAACGGTAG TAAACACGAT TTTAGGCGGC CGCTTTACCT CTTGGCTGAA TGATGAGCTA
AGGGTAAACG CAGGCTTAAC CTATGGTGCA CGCTCAGGTT TTACACCGTA TACCGACTCA
GGCGTGTTTA CTATCAGCAC TTTCACTAAG ACAGAGACGA CTCAAGAAGC GATAGATTTA
GCCTTAAAAA CCTATGCACG TTTATGGGAA AAAGGTATAG ATCAGGCGAC GTTAGATTCA
GCAAAAGCCT ATGTGAAGGG GCAGTTCCCA CCTAAGTTTG AAACCTCAGG CCAGTTGGCT
GGGTTATTGT CTGGCATGTA TTTGTACGGC TTCGATGACA AGTTTATCAA TGAGTTCCAA
GCTAAGGTGG ACGGTTTAAC CTTAGAAGAA ACCCAAAGAC TCGTGAAAGC TTACTTCCCA
CAGAAGGACT TACAATTTGT ACTAATTGGT AACGCGAGCA AGATTGCGCC TGTTGCAGCT
AAATATGGCA AAGTGCAAAC TGTCGATATT AACGCCACAG GATTTGGTCA ATAA
|
|---|
| Protein sequence | MKSFGKPSTL MAALALGTSL ALAGCAAISA PKLVDTGSFA MPSYDKFVLD NGLTVYLMPQ
REVPLITLNA VVRAGAVNDT TAGVAQMTAE GLLLGAAGKS KADIEQQVDF LGASLGADAD
KEGSYLSADF MAKDIDLMLG LFSAAILTPD FDAAEFDKLK QRAIAGLQQD KESPRAVIGR
YFDKLVFGDH PYGNAASGNS DSLEQITVSQ LRAFHKSYYQ PANTAITVVG DFDVTAMKAK
LTQTFGQWKD SEKLVQPNLN QGLPQLTEAK VLLVDKPDAI ETTFLIGGLG ISRNNPDYVG
LTVVNTILGG RFTSWLNDEL RVNAGLTYGA RSGFTPYTDS GVFTISTFTK TETTQEAIDL
ALKTYARLWE KGIDQATLDS AKAYVKGQFP PKFETSGQLA GLLSGMYLYG FDDKFINEFQ
AKVDGLTLEE TQRLVKAYFP QKDLQFVLIG NASKIAPVAA KYGKVQTVDI NATGFGQ
|
|---|
| |