| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_3488 |
|---|
| Symbol | |
|---|
| ID | 5080523 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella putrefaciens CN-32 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009438 |
|---|
| Strand | + |
|---|
| Start bp | 4052599 |
|---|
| End bp | 4053324 |
|---|
| Gene Length | 726 bp |
|---|
| Protein Length | 241 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 640500687 |
|---|
| Product | purine phosphorylase family protein 1 |
|---|
| Protein accession | YP_001184997 |
|---|
| Protein GI | 146294573 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG2820] Uridine phosphorylase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTATTC AACCCCATAT TCTCGTCGCG CCCCATCAAG TCAGTGAAAA AGCCGTCGTC
TGCGGCGAAC CCAATCGAGT CAACCGCATC GCGGCGCATC TAACGGATGT TGAATCCTTG
GCGGATAACC GCGAGTTTCG ACTGATACGT GGCCGTTATG GCGACACTAT AATCACCGTT
TGCAGCACTG GCATTGGCGC GCCCTCGGCG ATCATTGCCC TTGAAGAAAT GTATCAATGC
GGTGTTAAAC AACTTATCCG CATCGGCTCC GCTGGTGCGC TACAACCGCA AATAGCCATA
GGCGATGTAA TTATTGCCGA GGCCGCAGTG CGTGATGATG GCGGCTCTGC CAGCTATGTA
AAGCTCAGCT TTCCGGCCTG CGCCAATCAT CGTTTGGTCG GCAAACTGCA AGCATACTGC
GCGCAGCATC ATATATGTGC CCATAGCGGC GTAGTGCGCT CCCACGACAG TTTTTATACC
GATCAAGAAC AGGAGCTCTG CCACTATTGG CATCGCCAAG GCGTGCTCGG GGCCGATATG
GAAACCGCTG CGTTATTCAC CGTCGGCCGA CTGCGCCAGC TTGAAGTGGC GGCAATACTC
ACCAACGTAG TGCTATTTGA GCAGGATGTT AAAGCAGGAG TTAATGACTA TGTTGCATCG
TCCAAGGCAA GCGCCCAAGG TGAGCAACAC GCCATTTTAG CTGCGCTCAA CGCACTGTGT
GATTAG
|
|---|
| Protein sequence | MSIQPHILVA PHQVSEKAVV CGEPNRVNRI AAHLTDVESL ADNREFRLIR GRYGDTIITV
CSTGIGAPSA IIALEEMYQC GVKQLIRIGS AGALQPQIAI GDVIIAEAAV RDDGGSASYV
KLSFPACANH RLVGKLQAYC AQHHICAHSG VVRSHDSFYT DQEQELCHYW HRQGVLGADM
ETAALFTVGR LRQLEVAAIL TNVVLFEQDV KAGVNDYVAS SKASAQGEQH AILAALNALC
D
|
|---|
| |