Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_3464 |
Symbol | |
ID | 5079855 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | - |
Start bp | 4031129 |
End bp | 4031863 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640500663 |
Product | flagellar basal-body rod protein FlgF |
Protein accession | YP_001184973 |
Protein GI | 146294549 |
COG category | [N] Cell motility |
COG ID | [COG4787] Flagellar basal body rod protein |
TIGRFAM ID | [TIGR02490] flagellar basal-body rod protein FlgF [TIGR03506] fagellar hook-basal body proteins |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAGAAGA TGCTTTATAC CGCGGCGAGC GGTGCAGTTC GTATTCTTGA AGCGCAAAGT ATTCGTGCGA ATAACTTGGC TAACGCTGAA ACTGCAGGGT TTAAAGCCGA TCTAGAGCGG GTGAATGCGG TTGCTTTGGC TGCTCAAGGT AATAGCTTAA ATACGCGGGT AATGGCGCAG ACCGAAAACA GTGGTTTTAG CCACCAAAGT GGGGTGATCA ACCCTACAGG TAGAACCTTG GATTTGGCGA TTCGGGACCG TGGATTATTT ACGGTTGCCG TCGAGGGGGG CGAGGCTTAT ACCCGTTCAG GGGCTTTGAT TGCTAATGCC GAGGGAGAGT TAACCATTGA TGGCCGGCCA GTATTAGGAA ACGATGGCCC TATCGTACTC CCTGAGCATA AAGATCTGTT CATCGGTGAA GATGGTACCG TCAGTGTGTT GCCTTCAGAA GGTGGGATCA TTGAAGAAGT TGGTCGATTA AAACTAGTCA ATCCCGATTT AGCTTTAATG CAAAAAGGCC AAGATGGTTT GCTTTACGGC CGAGATGGTC AGTTGATGGC GCAGGATGAT GGCGTACTGG TCGATAGTGG ATTCCTTGAA TCGAGTAACG TGCAGGCCGT GTCGGAGCTT ATTGCGTCGA TGGATCTGAG CCGTCAGTTT GAAATTCAAG TTAAGTTAAT GAAAAGTGCC GAAAAACTAG CTGAGGCTGG TAATCGTTTG CTGGGTAATG TTTAA
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Protein sequence | MEKMLYTAAS GAVRILEAQS IRANNLANAE TAGFKADLER VNAVALAAQG NSLNTRVMAQ TENSGFSHQS GVINPTGRTL DLAIRDRGLF TVAVEGGEAY TRSGALIANA EGELTIDGRP VLGNDGPIVL PEHKDLFIGE DGTVSVLPSE GGIIEEVGRL KLVNPDLALM QKGQDGLLYG RDGQLMAQDD GVLVDSGFLE SSNVQAVSEL IASMDLSRQF EIQVKLMKSA EKLAEAGNRL LGNV
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