| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_3449 |
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| Symbol | fliA |
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| ID | 5079840 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 4018083 |
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| End bp | 4018799 |
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| Gene Length | 717 bp |
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| Protein Length | 238 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640500648 |
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| Product | flagellar biosynthesis sigma factor |
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| Protein accession | YP_001184958 |
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| Protein GI | 146294534 |
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| COG category | [K] Transcription |
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| COG ID | [COG1191] DNA-directed RNA polymerase specialized sigma subunit |
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| TIGRFAM ID | [TIGR02479] RNA polymerase sigma factor, FliA/WhiG family
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.444138 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACGACAG ATGGCCAACT TGCATATCAA CAAACCTGTG ATTATCCAAT CGAAGAACGG
CAATCTGAAC AACAGGTTAT TCGGCAATAT TTACCACTGA TTAAACGTAT CGTGTCGCAG
ATGCGTAGCC ACTGTGGCGT CATGTTATCG CTTGAGGATA TGGAACAAAT AGGGATGATG
GCCTTGCTTG AGTCATCGCG TCGCTATCCT GGAGAGCTCG ATAACGGATT TATTTCTTTC
GCGGGACAAC GTATCCGCGG CGCAATATTG GATGAGTTAA GAAGGCAAGA TTGGCGTCCT
CGCCCTGTTA GGCAACAAGC CCATGAACTG AATGATGTTG TTAGACGCTT GAGCCGTGAA
ATGGGACGGG AACCTAGCGA TCTCGAGGTT GCCAGTGCAT TAGGTCTTAG TGCTGAAGAT
TACCGAGAAC GCTTATATTC CACACAAGCG GAGTCGATGA AAAGCTTAGA TGAATTGTTG
TTGGTGGGCG AACATCCGGT CGATAGAGGC AATGATGTTG AACAATTGAT GCTAAAGCAG
ACCTTGATCA AAGTTATTTC AAAATTAAAT GAAAGAGAAC AGTTAATCCT GTCGCTTTAC
TATCATCATG AGCTGAATTT AAAAGAAATT GCCATGGCAT TAGGGTTAAC AGAAACACGT
ATTTGTCAGT TACATAAATC AGCAATTTCA CAGTTAAAAA CAATATTGCA GCGCTAA
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| Protein sequence | MTTDGQLAYQ QTCDYPIEER QSEQQVIRQY LPLIKRIVSQ MRSHCGVMLS LEDMEQIGMM
ALLESSRRYP GELDNGFISF AGQRIRGAIL DELRRQDWRP RPVRQQAHEL NDVVRRLSRE
MGREPSDLEV ASALGLSAED YRERLYSTQA ESMKSLDELL LVGEHPVDRG NDVEQLMLKQ
TLIKVISKLN EREQLILSLY YHHELNLKEI AMALGLTETR ICQLHKSAIS QLKTILQR
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