Gene Sputcn32_3427 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_3427 
Symbol 
ID5079818 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp3998487 
End bp3999221 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content44% 
IMG OID640500626 
Producthypothetical protein 
Protein accessionYP_001184936 
Protein GI146294512 
COG category[S] Function unknown 
COG ID[COG4582] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTGACT TAGTTTACGA ACAGCCATTA AACGAGAAAA TTCGCAGCTA TTTACGGCTC 
GAATATCTCG ATAAACAGCT GCGTACTAAT CTCAATCATG ACCACCAACA TAGATGCTTC
TATCCGCTGT TTTCGCTATG TGAATTATCC GAACGCTGTG ATTACCGCAA TGAAGTCTTA
AAGGATATTG AGCGTCATCT GTTACAACTC AATAAATGGC AAGAACTCGA ACAAGCAGAC
CACCAGCAGA TCGACTTTTA TATCAATGCC CTTACCCAAG CCCGTGAGTT ACTTCAAAAA
CCAGAGCGGT TCGGCAGTCA ACTCAAGCAA GATCGATTTT TATCCGCTCT ACGACAACGA
TTTGGTATGC CTGGTGCGTG TTGTAGTTTT GACCTACCCC AGCTACATTT TTGGTTAGCC
AAACCTTGGG AAGAAAGACA ACAGGATTAC CTTGCTTGGA TAGCACATTT TGACCCACTG
CTCACCCCCA TTACCCAACT ACTTCAACTC ACCCGCAGCA CGTCCATTTT TAATAATGCC
ATTGCCCATG CCGGTTTTTA TCAAGGCGAT AGCAACCAAG CTTTATCCTT AGTTCGTGTT
AAACTTGATG CTTCACAGGG GTGTTACCCC ACTATTAGCG GACATAAAAA TCGCTACGCC
ATTCACTTTG TCCAGTTTGA TCAACAACGT CACTCCGATA AACCCATCGA TTTCTTACTA
GCGACCTGTG TCTGA
 
Protein sequence
MTDLVYEQPL NEKIRSYLRL EYLDKQLRTN LNHDHQHRCF YPLFSLCELS ERCDYRNEVL 
KDIERHLLQL NKWQELEQAD HQQIDFYINA LTQARELLQK PERFGSQLKQ DRFLSALRQR
FGMPGACCSF DLPQLHFWLA KPWEERQQDY LAWIAHFDPL LTPITQLLQL TRSTSIFNNA
IAHAGFYQGD SNQALSLVRV KLDASQGCYP TISGHKNRYA IHFVQFDQQR HSDKPIDFLL
ATCV