Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_3427 |
Symbol | |
ID | 5079818 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | + |
Start bp | 3998487 |
End bp | 3999221 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640500626 |
Product | hypothetical protein |
Protein accession | YP_001184936 |
Protein GI | 146294512 |
COG category | [S] Function unknown |
COG ID | [COG4582] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTGACT TAGTTTACGA ACAGCCATTA AACGAGAAAA TTCGCAGCTA TTTACGGCTC GAATATCTCG ATAAACAGCT GCGTACTAAT CTCAATCATG ACCACCAACA TAGATGCTTC TATCCGCTGT TTTCGCTATG TGAATTATCC GAACGCTGTG ATTACCGCAA TGAAGTCTTA AAGGATATTG AGCGTCATCT GTTACAACTC AATAAATGGC AAGAACTCGA ACAAGCAGAC CACCAGCAGA TCGACTTTTA TATCAATGCC CTTACCCAAG CCCGTGAGTT ACTTCAAAAA CCAGAGCGGT TCGGCAGTCA ACTCAAGCAA GATCGATTTT TATCCGCTCT ACGACAACGA TTTGGTATGC CTGGTGCGTG TTGTAGTTTT GACCTACCCC AGCTACATTT TTGGTTAGCC AAACCTTGGG AAGAAAGACA ACAGGATTAC CTTGCTTGGA TAGCACATTT TGACCCACTG CTCACCCCCA TTACCCAACT ACTTCAACTC ACCCGCAGCA CGTCCATTTT TAATAATGCC ATTGCCCATG CCGGTTTTTA TCAAGGCGAT AGCAACCAAG CTTTATCCTT AGTTCGTGTT AAACTTGATG CTTCACAGGG GTGTTACCCC ACTATTAGCG GACATAAAAA TCGCTACGCC ATTCACTTTG TCCAGTTTGA TCAACAACGT CACTCCGATA AACCCATCGA TTTCTTACTA GCGACCTGTG TCTGA
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Protein sequence | MTDLVYEQPL NEKIRSYLRL EYLDKQLRTN LNHDHQHRCF YPLFSLCELS ERCDYRNEVL KDIERHLLQL NKWQELEQAD HQQIDFYINA LTQARELLQK PERFGSQLKQ DRFLSALRQR FGMPGACCSF DLPQLHFWLA KPWEERQQDY LAWIAHFDPL LTPITQLLQL TRSTSIFNNA IAHAGFYQGD SNQALSLVRV KLDASQGCYP TISGHKNRYA IHFVQFDQQR HSDKPIDFLL ATCV
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