| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_3425 |
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| Symbol | |
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| ID | 5079816 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 3996607 |
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| End bp | 3997533 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640500624 |
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| Product | prepilin peptidase |
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| Protein accession | YP_001184934 |
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| Protein GI | 146294510 |
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| COG category | [N] Cell motility
[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1989] Type II secretory pathway, prepilin signal peptidase PulO and related peptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.195496 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTGAAT TTATCACTTT ATTAGGCCAA TCTTTTGAAC AGAGTCCTTG GCTCTTCGTC
ACCTTAAGCT TTATTTTTGC CGCGACTATT GGCAGTTTTC TGAATGTGGT CATCCACCGA
CTCCCTATCA TGATGAAGCG TGAATGGCAG CAGGAATGTA ATCAATATTT ACAGGAATAC
CATGCCGATA TCGTTAACCA AGTCGGTATC GATAGGCTTA ATAAACCCAT AGATAGCTAT
CCCGAAAAGT ACAATATTGT GGTGCCAGGC TCAGCTTGCC CTCAGTGTAA AACCGCCATC
AAACCTTGGC ATAATATGCC TGTGCTCGGT TGGTTAATCC TTAGGGGGAA ATGCGCCGCC
TGTCATGCAC CTATCTCGAC CCGTTATCCG ATTATTGAAT TAATCACAGG TTTACTGATC
GCTGCTTTAG CTTGGCATTT TGGCCCAAGT TGGCAATTTG TTTTTGCCTC TTTACTCACC
TTTGTATTGA TTGCGCTGAC AGGTATAGAT CTGGATGAAA TGTTGTTACC GGATCAGTTA
ACACTGCCCC TACTGTGGCT TGGGCTATTA CTCAATTTAC ACCATACCTT TGCTAGCCCA
ACGGATGCCA TTATCGGTGC AGCCGCAGGC TATTTAAGCC TATGGTCAAT TTTCTGGGTG
TTTAAGTTAC TCACAGGCAA AGAAGGTATG GGCTATGGCG ACTTTAAACT GTTGGCCGTT
TTTGGTGCTT GGCTTGGCTG GCAAATGTTG CCACTGGTGA TTTTACTCTC CTCATTAGTG
GGTGCTGTTG TGGGCATTGG CATGATTATC AGCAAACGTA ATCAGATGGA TAACCCTATT
CCCTTTGGCC CTTATATTGC CGCCGCAGGC TGGATTGCAC TGGTTTGGGG AAACACTATC
GTCGACTGGT ATTTAGGGAC ACTATAA
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| Protein sequence | MTEFITLLGQ SFEQSPWLFV TLSFIFAATI GSFLNVVIHR LPIMMKREWQ QECNQYLQEY
HADIVNQVGI DRLNKPIDSY PEKYNIVVPG SACPQCKTAI KPWHNMPVLG WLILRGKCAA
CHAPISTRYP IIELITGLLI AALAWHFGPS WQFVFASLLT FVLIALTGID LDEMLLPDQL
TLPLLWLGLL LNLHHTFASP TDAIIGAAAG YLSLWSIFWV FKLLTGKEGM GYGDFKLLAV
FGAWLGWQML PLVILLSSLV GAVVGIGMII SKRNQMDNPI PFGPYIAAAG WIALVWGNTI
VDWYLGTL
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