| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_3424 |
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| Symbol | |
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| ID | 5079815 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 3995142 |
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| End bp | 3996407 |
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| Gene Length | 1266 bp |
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| Protein Length | 421 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640500623 |
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| Product | type II secretion system protein |
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| Protein accession | YP_001184933 |
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| Protein GI | 146294509 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1459] Type II secretory pathway, component PulF |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.760778 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTACGG CAACGACAGT AAAAAAGCCT CGCCCAAAGA AGATTGAGCC CAAAAGCCAA
CCAAAGATTT TTACCTTTGA ATGGAAAGGC ACTAACCGCG ATGGCAAAAA AACGGGTGGT
GAGTTAAAGG GTGCAACAGT TGCAGAGGTA AAAAGCCAGC TCAAATCCCA AGGAGTAAAT
CCTAAAGTCG TACGAAAAAA AGCATCTCCT TTCTTTGCCC GTAATCCTGA TATCAAGCCC
ATGGATATCG CGATGGCAAC TCGCCAGATA GCGACTATGC TGGCCGCCGG CGTTCCGCTT
GTGACCACAA TAGAAATATT GGGGCGTGGC CATGAAAAAC TCAAAATGCG CGATCTGTTA
GGGACAATTC TGTCAGAGAT TCAATCGGGT ATTCCGCTAT CAGACGCCCT GCGCCCCCAT
AGGCGTTATT TTGATGATCT CTATGTAGAC TTAGTGGCAG CAGGTGAACA CTCAGGTTCG
CTCGATGCGG TATTTGATCG CATTGCAACC TACAGGGAAA AAGCGGAGCA GCTAAAATCT
AAAATCAAAA AAGCCATGTT TTATCCCGCC GCCGTTGTGG TAGTCGCTAT TTTAGTGACC
ACATTGTTAT TACTCTTTGT CGTACCTCAG TTCGAAGATA TTTTTAAAGG ATTTGGCGCA
GAACTCCCCG CCTTTACACA GATGATCATT GGTATCTCGC GATGGTTGCA AAGCTCTTGG
TATCTCTTTT TCATTGCGAT TACGGTGGGA ATTTGGTTAT TTGTCCGTGC CCATCGCAAT
TCACAAATGG TTCGTGACCG TGTTGATGAG TTTGTACTTA AGATCCCTGT TATCGGCGAA
ATTCTGCATA AGGCGGCCAT GGCGCGCTTT TCTCGTACCT TAGCCACCAC CTTTGCGGCA
GGTGTGCCGT TGATTGATGG GATGGAATCC GCAGCGGGAG CATCAGGTAA TGCCGTATAT
CGCAAAGCAC TGTTAAAAGT ACGCCAAGAG GTCATGGCTG GTATGCAAAT GAACGTCGCG
ATGCGTACTA CGGGTTTGTT CCCCGATATG CTGATCCAAA TGGTGATGAT TGGTGAAGAG
TCTGGATCGC TAGATAATAT GCTAAATAAG GTGGCTAATA TTTATGAAAT GCAAGTCGAT
GACGCTGTGG ATGGTTTATC GAGTCTAATT GAACCCATTA TGATGGTGGT GATTGGCACC
CTTGTGGGTG GTTTAATTGT GGGAATGTAT CTCCCTATCT TCCAAATGGG AAATGTCGTA
GGCTAA
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| Protein sequence | MATATTVKKP RPKKIEPKSQ PKIFTFEWKG TNRDGKKTGG ELKGATVAEV KSQLKSQGVN
PKVVRKKASP FFARNPDIKP MDIAMATRQI ATMLAAGVPL VTTIEILGRG HEKLKMRDLL
GTILSEIQSG IPLSDALRPH RRYFDDLYVD LVAAGEHSGS LDAVFDRIAT YREKAEQLKS
KIKKAMFYPA AVVVVAILVT TLLLLFVVPQ FEDIFKGFGA ELPAFTQMII GISRWLQSSW
YLFFIAITVG IWLFVRAHRN SQMVRDRVDE FVLKIPVIGE ILHKAAMARF SRTLATTFAA
GVPLIDGMES AAGASGNAVY RKALLKVRQE VMAGMQMNVA MRTTGLFPDM LIQMVMIGEE
SGSLDNMLNK VANIYEMQVD DAVDGLSSLI EPIMMVVIGT LVGGLIVGMY LPIFQMGNVV
G
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