Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_3420 |
Symbol | |
ID | 5079811 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | - |
Start bp | 3989784 |
End bp | 3990326 |
Gene Length | 543 bp |
Protein Length | 180 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640500619 |
Product | N-acetyl-anhydromuranmyl-L-alanine amidase |
Protein accession | YP_001184929 |
Protein GI | 146294505 |
COG category | [V] Defense mechanisms |
COG ID | [COG3023] Negative regulator of beta-lactamase expression |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.313101 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCTTTG AGTTTGGGTG GTATAGCGCC GCTCGGCGCA GTGAGTCGCC ACATTTTAAT CAACGCCCTG AGGCTGAAGT GAGTTTATTG GTGATCCACA ATATTAGCTT GCCGGCGGGC TGTTTTGGTT TACCTTATAT TGATCAATTA TTTAAAGGGT GTTTAGATAC CAGTGCCGAT GACAGTTTTA CTGAGTTAGC GGGCTTGCAA GTATCAGCAC ATTTTTTGAT CCGCCGTGAT GGTGAGTGTG TACAATATGT CAGTTGTCAC GATAGGGCAT GGCACGCTGG CGTATCTTGC TATGGCGAAA GGGAAAATTG TAATGATTTT TCTATTGGTA TTGAGCTTGA AGGGACGGAT ACTGAGCCTT ACGTTGATGC CCAATATGTG CGTTTGGTTG AGTTAACACA GGCATTGTTG ATTGAATATC CATTATTAAA TACTAAGCGG ATTGTTGGGC ACTGTGATAT AGCACCATTA CGTAAAACAG ATCCCGGGCA AAGTTTTGAT TGGGAAAGAT ATTTAAGGGC GCTGCGCTGT TAG
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Protein sequence | MSFEFGWYSA ARRSESPHFN QRPEAEVSLL VIHNISLPAG CFGLPYIDQL FKGCLDTSAD DSFTELAGLQ VSAHFLIRRD GECVQYVSCH DRAWHAGVSC YGERENCNDF SIGIELEGTD TEPYVDAQYV RLVELTQALL IEYPLLNTKR IVGHCDIAPL RKTDPGQSFD WERYLRALRC
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