Gene Sputcn32_3420 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_3420 
Symbol 
ID5079811 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp3989784 
End bp3990326 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content44% 
IMG OID640500619 
ProductN-acetyl-anhydromuranmyl-L-alanine amidase 
Protein accessionYP_001184929 
Protein GI146294505 
COG category[V] Defense mechanisms 
COG ID[COG3023] Negative regulator of beta-lactamase expression 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.313101 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCTTTG AGTTTGGGTG GTATAGCGCC GCTCGGCGCA GTGAGTCGCC ACATTTTAAT 
CAACGCCCTG AGGCTGAAGT GAGTTTATTG GTGATCCACA ATATTAGCTT GCCGGCGGGC
TGTTTTGGTT TACCTTATAT TGATCAATTA TTTAAAGGGT GTTTAGATAC CAGTGCCGAT
GACAGTTTTA CTGAGTTAGC GGGCTTGCAA GTATCAGCAC ATTTTTTGAT CCGCCGTGAT
GGTGAGTGTG TACAATATGT CAGTTGTCAC GATAGGGCAT GGCACGCTGG CGTATCTTGC
TATGGCGAAA GGGAAAATTG TAATGATTTT TCTATTGGTA TTGAGCTTGA AGGGACGGAT
ACTGAGCCTT ACGTTGATGC CCAATATGTG CGTTTGGTTG AGTTAACACA GGCATTGTTG
ATTGAATATC CATTATTAAA TACTAAGCGG ATTGTTGGGC ACTGTGATAT AGCACCATTA
CGTAAAACAG ATCCCGGGCA AAGTTTTGAT TGGGAAAGAT ATTTAAGGGC GCTGCGCTGT
TAG
 
Protein sequence
MSFEFGWYSA ARRSESPHFN QRPEAEVSLL VIHNISLPAG CFGLPYIDQL FKGCLDTSAD 
DSFTELAGLQ VSAHFLIRRD GECVQYVSCH DRAWHAGVSC YGERENCNDF SIGIELEGTD
TEPYVDAQYV RLVELTQALL IEYPLLNTKR IVGHCDIAPL RKTDPGQSFD WERYLRALRC