| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_3419 |
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| Symbol | |
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| ID | 5079810 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 3988733 |
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| End bp | 3989584 |
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| Gene Length | 852 bp |
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| Protein Length | 283 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640500618 |
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| Product | regulatory protein AmpE |
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| Protein accession | YP_001184928 |
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| Protein GI | 146294504 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG3725] Membrane protein required for beta-lactamase induction |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.535716 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCATTAT TTTCATTGTT AGTCGCCATT TTGGTGGAGC GACTTAAATT TCTTCCCTCG
TCGTGGCAAT TTGATCGATT GCTACAGTCT TATCAGATGA CGTTTTTTGG TGATAAAGCG
TCTTTGACCA CACCTATGAT GGCACTCGCT CTAGTGTTGC CTGCTTTGGT GGTGTATGTC
TTATCTTGGT TAGTTGCAGG AATGTTTTGG GGAATACTCA GTTTGGCGCT TTGGGTTTTT
GTGGCGGCAA TTTGTTTTAA TCACCTGAAA CAACGTGAAA TTTTTAAAAA ATATATGCAA
GCCGCTTGTC GTTCGGATGT GCAAGCCTGC TATCTTTATG CCGCAGAGCT TGATTGTAGC
GAATGCCTAG ATGCGGTATC TGAAAAGGAT TTAGGGGCTA AGGTTGGCCA GAGTGTGGCA
TGGATTAACT ATCGTTATTA TGGCGCTGTA GCACTGTTTT TGATTTTCTT TGGGCCCGTC
GGCACAGTGC TCTATTGCAC AGTACGGTAT TATGCTGAAG AAAATGCGCG AAAATCCCTT
AATTTACCTT TAGTGGATGA GTTTATCGCC GTTTTAGATT GGATTCCGAG CCGGCTATTT
GCCTTTGGCT ATGCATTAAG CGGGCAATTT AGTGAGGGAT TAACGGCATG GCGTAATAAC
GCGCTACGTT TTAATACCAG TGCAAGAAGG GTGATTACTG AAACGGCAGT GGCTGCGCAA
CCTTTACCTG AGGTTTCTGA TGCACCTATT TGTGTACAAT CGACCCTAGC GTTATTAGTG
TTGAGTAAAC GTAACTTTAC ACTTATGGTT GCAATTGTTT CATTATTGAC CATTTTCGGA
TTGGTGAGTT AA
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| Protein sequence | MALFSLLVAI LVERLKFLPS SWQFDRLLQS YQMTFFGDKA SLTTPMMALA LVLPALVVYV
LSWLVAGMFW GILSLALWVF VAAICFNHLK QREIFKKYMQ AACRSDVQAC YLYAAELDCS
ECLDAVSEKD LGAKVGQSVA WINYRYYGAV ALFLIFFGPV GTVLYCTVRY YAEENARKSL
NLPLVDEFIA VLDWIPSRLF AFGYALSGQF SEGLTAWRNN ALRFNTSARR VITETAVAAQ
PLPEVSDAPI CVQSTLALLV LSKRNFTLMV AIVSLLTIFG LVS
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