| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_3418 |
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| Symbol | pdhR |
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| ID | 5079809 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 3987471 |
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| End bp | 3988223 |
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| Gene Length | 753 bp |
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| Protein Length | 250 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640500617 |
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| Product | transcriptional regulator PdhR |
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| Protein accession | YP_001184927 |
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| Protein GI | 146294503 |
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| COG category | [K] Transcription |
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| COG ID | [COG2186] Transcriptional regulators |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.530869 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCCTATA GTAAAATTAA TCAGCCAAAA ATTTCTGATG TGATCATGGC GCAATTAGAG
CAAATGATCC TAGAGGGCAG TTTAAAGCCC GGTCAGAAAT TACCGCCCGA ACGCGAACTG
GCGATCCAGT TTGAAGTGTC TCGACCTTCT TTGCGTGAAG CGATTCAAAA GCTTGAGGCA
AAAGGACTGT TAATGCGCCG TCAAGGTGGC GGTACTTATG TCAAAGAACA ACTCTGGCAG
ACTCTTGCCG ATCCTATTGT TGAACTGATG AATTCCGATC CAGAAAGTCA ATATGACTTA
CTGGAGTTCC GTCATGCGAC TGAAGGCATG ATGGCTTATT TTGCCGCGTT GCGTGGTACC
GACGCCGATA TGCAAAATAT CAAACGTATG ATCCTCGAAG TTGAAGCCGC AAGTATTATC
GAACAAAAAG CCGCCGCGAT TGTACATTTT TATCGTGCTG TGGCCGAAGC GTCACATAAT
GTGGCCATGT TACATCTCGT ACTCAGTTTA ACCCCTGTGC TGCATAAAAA TGTGGCGCAA
AATTTGGAGC TTTTAAGCCG CCGCGAAGAA GCTTCTACCA TGGCAAACGA TCATAGACGG
GCTTTGCTCG CTGCTATCGT TCGCCGCGAT CCCGACGCCG CCAGAGAAGC CTCGAATGAA
CATTTAAGTT ACATCGAAGA GGTGATGTTA TCTGTGCGGG AAGAAGATAG CCGGTTGCAG
CGAAGCTTGC GCCGCTTAAA GAGTGGCGCT TAA
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| Protein sequence | MAYSKINQPK ISDVIMAQLE QMILEGSLKP GQKLPPEREL AIQFEVSRPS LREAIQKLEA
KGLLMRRQGG GTYVKEQLWQ TLADPIVELM NSDPESQYDL LEFRHATEGM MAYFAALRGT
DADMQNIKRM ILEVEAASII EQKAAAIVHF YRAVAEASHN VAMLHLVLSL TPVLHKNVAQ
NLELLSRREE ASTMANDHRR ALLAAIVRRD PDAAREASNE HLSYIEEVML SVREEDSRLQ
RSLRRLKSGA
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