| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_3416 |
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| Symbol | |
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| ID | 5079807 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 3982700 |
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| End bp | 3984709 |
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| Gene Length | 2010 bp |
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| Protein Length | 669 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640500615 |
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| Product | pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase |
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| Protein accession | YP_001184925 |
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| Protein GI | 146294501 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes
[COG1038] Pyruvate carboxylase |
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| TIGRFAM ID | [TIGR01348] pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0772097 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTGAAT TAAAAGAAGT TTTTGTTCCT GATATCGGCG GCGACGAAGT GCAAGTGATC
GAAATTTGTG CCGCTGTGGG TGATACCCTC GCGGCCGATG AATCGATTAT TACCGTTGAA
AGCGACAAGG CGACTATGGA TATTCCTGCG CCTTTCGCTG GTGTGTTAGC CGAGTTAAAA
GTGGCTGTGG GTGATAAAGT CTCTGAAGGT ACTTTGATTG CTATGATGCA AGCAGCGGGC
GCGGCAGCTG CCGATCCTGC TCCAGTTGCG GCACCATCAT CCGCGCCAGC AGCTGCACCG
GTTCAAGCGG CTCCTGCTCC CGCAGTACCA GCAGCGACAT CGACTCAAGC TGTTGAGACA
AAAGTCGTTG AAGTGGCTGT GCCAGATATC GGTGGCGACA CTGATGTCTC GGTTATCGAA
GTGCTGGTTG CCGTCGGTGA TAAGATTGAG GTTGATAGCG GTTTAATTAC TCTCGAAACT
GACAAAGCGA CCATGGATGT ACCTTCACCT TTTGCTGGTG TGGTAAAAGA AGTCAAAGTA
GCCGTTGGCG ATAAAGTGTC GGAAGGCTCT TTAGTCATCA TGCTTGAAGT GGGTGGCGCA
GCTCCTGCTG TGGCAGCAAG TGCGCCAACC GTTGCCGCTC AGGCGGCTCC TGCCGCTACG
GTAGCGCCAG TGGCTCCGGC TTCTGCAACT CCAACTGCAA GTGTGGTTAC GGTAAAAGAA
ATTCAAGTGC CAGATATTGG CGATGCAAGC AATGTCGATG TGATTGAAGT GCTAGTGTCT
GTGGGCGATA TGATCACGGC CGACCAAGGT TTAATAACCC TTGAAACTGA CAAAGCCACC
ATGGAAGTGC CAGCGCCATT TGCCGGCAAA CTATTGTCGT TAACCGTTAA AGTGGGTGAT
AAGGTTTCTC AAGGTAGCGT GATAGCTACC GTTGAAACGA CTGCTGTTGG AGCCGCTGCG
CCTGCGCCAG TTGCTCAAGC GCCAGCAGTG CAAGAAGTGG CGCCAGTTGC TGCTCAAGCA
CCTGCAAGCC GTCCGCCAGT GCCGCATCAT CCAAGTGCAG GTGCGCCTGT GTCGACTGGT
GCGGTACATG CATCGCCTGC GGTACGCCGT TTAGCCCGTG AATTTGGTGT GGATCTCACC
CAAGTCACTG GTTCTGGCCG TAAAGGTCGC ATTATGAAAG AAGACGTTCA GGCGTATGTG
AAATACGAAC TGTCGCGTCC GAAAGCAACT GCGGCAACGT CAGTCGGCGC TGGCAATGGC
GGTGGTCTGC AAGTGATTGC AGCACCTAAA GTGGATTTCA GTAAGTTTGG TGAAGTGGAA
GAAATTCCAT TAAGCCGTAT CCAGAAGATC TCTGGCCCTA ACTTACACCG CAACTGGGTG
ACTATTCCGC ATGTGACTCA GTTCGATGAA GCTGATATCA CTGAAATGGA AGAGTTCCGT
AAGCAGCAAA ACGACGCAGC GGCGAAGAAG AAAGCCGATT ATAAGATCAC GCCTTTAGTC
TTTATGATGA AAGCGGTGGC TAAGACGTTG CAACAGTTCC CAGTGTTCAA CTCGAGCTTA
AGCTCTGATG GCGAATCACT GATCCAGAAG AAGTATTTCC ACATCGGTGT GGCGGTGGAT
ACGCCAAACG GTTTGGTTGT GCCAGTCGTG CGTGACGTGG ATAAGAAAGG CATTATCGAG
TTATCTCGTG AACTGGCTGA TATCTCTATC CGTGCCCGTG ATGGCAAGCT GAAATCTGCT
GATATGCAGG GCAGCTGTTT CACCATTTCA AGTTTAGGTG GTATTGGCGG TACGGCGTTT
ACGCCTATCG TTAACTACCC AGATGTGGCG ATTTTAGGTG TGTCTAAATC TGAAATTAAG
CCTAAGTGGA ATGGTAAAGA GTTCGAGCCT AAATTGATGT TGCCACTGTC GCTATCATAC
GATCACCGCG TGATCGATGG TGCCATGGCT GCACGCTTTA GCGTGACCCT GTCAGGAATT
CTGTCCGATA TTCGTACTTT GATTCTGTAA
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| Protein sequence | MAELKEVFVP DIGGDEVQVI EICAAVGDTL AADESIITVE SDKATMDIPA PFAGVLAELK
VAVGDKVSEG TLIAMMQAAG AAAADPAPVA APSSAPAAAP VQAAPAPAVP AATSTQAVET
KVVEVAVPDI GGDTDVSVIE VLVAVGDKIE VDSGLITLET DKATMDVPSP FAGVVKEVKV
AVGDKVSEGS LVIMLEVGGA APAVAASAPT VAAQAAPAAT VAPVAPASAT PTASVVTVKE
IQVPDIGDAS NVDVIEVLVS VGDMITADQG LITLETDKAT MEVPAPFAGK LLSLTVKVGD
KVSQGSVIAT VETTAVGAAA PAPVAQAPAV QEVAPVAAQA PASRPPVPHH PSAGAPVSTG
AVHASPAVRR LAREFGVDLT QVTGSGRKGR IMKEDVQAYV KYELSRPKAT AATSVGAGNG
GGLQVIAAPK VDFSKFGEVE EIPLSRIQKI SGPNLHRNWV TIPHVTQFDE ADITEMEEFR
KQQNDAAAKK KADYKITPLV FMMKAVAKTL QQFPVFNSSL SSDGESLIQK KYFHIGVAVD
TPNGLVVPVV RDVDKKGIIE LSRELADISI RARDGKLKSA DMQGSCFTIS SLGGIGGTAF
TPIVNYPDVA ILGVSKSEIK PKWNGKEFEP KLMLPLSLSY DHRVIDGAMA ARFSVTLSGI
LSDIRTLIL
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